 |
Job Description | P76086 | Confidence | 28.66% | Date | Thu Jan 5 12:18:38 GMT 2012 |
Rank | 257 | Aligned Residues | 43 |
% Identity | 19% | Template | d1y0ua_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| ArsR-like transcriptional regulators
|
Resolution | 1.60 |
|
  |   |
42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | L | A | A | L | L | E | G | L | G | F | G | E | R | F | V | R | T | A | L | F | R | L | N | K | E | G | W | L | D | V | S | R | I | G | R | R | S | F | Y | S | L | S | D | K | G | L |
Query Conservation |   |
  |
|
|   |
|   |   |   |   |
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|   |   |
|   |
|   |   |   |
|   |
|
|   |
|   |
|   |
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |
|
|   |
|
|
|   |
|
|   |
|
|
|
|   |
|
|   |
|
|   |   |   |   |   |
|   |
| . | . | . | . |   |   |
|
|
|   |
|   |
Template Sequence |   |
S | E | E | E | I | X | Q | T | L | S | L | S | K | K | Q | L | D | Y | H | L | K | V | L | E | A | G | F | C | I | E | R | V | G | E | R | . |
. |
. |
. |
W | V | V | T | D | A | G | K |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  | T | T |  | . | . | . | . |  |  |  |
| T | T | T |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  | . | . | . | . |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | |
|
|
|
. | . | 80 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|