Return to main results Retrieve Phyre Job Id

Job DescriptionP76086
Confidence97.36%DateThu Jan 5 12:18:38 GMT 2012
Rank6Aligned Residues54
% Identity17%Templated1ub9a_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.05

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   45....50.........60.........70..... ....80.........90........
Predicted Secondary structure 






...



Query SS confidence 






























. . .






















Query Sequence  ALLEGLGFGERFVRTALFRLNKEGWLDVSRI. . . GRRSFYSLSDKGLRLTRRAESKI
Query Conservation   
    



 









  
 
   
 ...

 
 
 

  
      
  

Alig confidence 






























...






















Template Conservation 


  
 

   

  
  

  


       


     

  
          
Template Sequence  QIQKVLDLTPGNLDSHIRVLERNGLVKTYKVIADRPRTVVEITDFGMEEAKRFLSSL
Template Known Secondary structure  TT

TTS
SSS

Template Predicted Secondary structure 















Template SS confidence 
























































   35....40.........50.........60.........70.........80.........90.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions