Return to main results Retrieve Phyre Job Id

Job DescriptionP76086
Confidence96.85%DateThu Jan 5 12:18:38 GMT 2012
Rank20Aligned Residues51
% Identity22%Templated1r1ta_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain ArsR-like transcriptional regulators
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50.........60.........70.........80.........90...
Predicted Secondary structure 










Query SS confidence 


















































Query Sequence  LAALLEGLGFGERFVRTALFRLNKEGWLDVSRIGRRSFYSLSDKGLRLTRR
Query Conservation 

 
    



 









  
 
   
 

 
 
 

  
      
Alig confidence 


















































Template Conservation 
 


  
 

  


 

  
  



   
 

   
 
    
  
  
Template Sequence  VGDLAQAIGVSESAVSHQLRSLRNLRLVSYRKQGRHVYYQLQDHHIVALYQ
Template Known Secondary structure  T

TTSTTSS
Template Predicted Secondary structure 








Template SS confidence 


















































   62.......70.........80.........90.........100.........110..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions