Job Description P76086 Confidence 21.31% Date Thu Jan 5 12:18:38 GMT 2012 Rank 282 Aligned Residues 50 % Identity 14% Template d1ku7a_ SCOP info DNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma4 domain Resolution 2.40

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	H	A	V	N	A	V	P	V	S	G	T	S	L	I	S	S	L	Y	G	D	S	L	S	H	R	G	G	E	I	W	L	G	S	L	A	A	L	L	E	G	L	G	F	G	E	R	F	V	R	T	A	L	F	R
Query Conservation
Alig confidence																									.	.	.											.	.	.
Template Conservation																									.	.	.											.	.	.
Template Sequence		L	E	K	A	L	S	K	L	S	E	R	E	A	M	V	L	K	M	R	K	G	L	I	.	.	.	D	G	R	E	H	T	L	E	E	V	.	.	.	G	A	Y	F	G	V	T	R	E	R	I	R	Q	I	E	N	K
Template Known Secondary structure		T	T					S	S													T	T	T	.	.	.	T	S									.	.	.					T	S
Template Predicted Secondary structure																									.	.	.											.	.	.
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.				.	.	.	.	.	.	.	.	400	.				.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions