Job Description P76086 Confidence 32.11% Date Thu Jan 5 12:18:38 GMT 2012 Rank 244 Aligned Residues 83 % Identity 17% Template d1bjaa_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Transcription factor MotA, activation domain Resolution 2.19

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	L	D	T	F	I	Q	H	A	V	N	A	V	P	V	S	G	T	S	L	I	S	S	L	Y	G	D	S	L	S	H	R	G	G	E	I	W	L	G	S	L	A	A	L	L	E	G	L	G	F	G	E	R	F	V	R	T	A	L	F	R	L	N	K	E	G	W	L	D	V	S	R	I	G	R	R	S	F	Y
Query Conservation
Alig confidence																												.	.	.	.	.	.																			.	.																								.	.	.	.
Template Conservation																												.	.	.	.	.	.																			.	.																								.	.	.	.
Template Sequence		S	K	V	T	Y	I	I	K	A	S	N	D	V	L	N	E	K	T	A	T	I	L	I	T	I	A	.	.	.	.	.	.	K	K	D	F	I	T	A	A	E	V	R	E	V	H	P	D	L	G	.	.	N	A	V	V	N	S	N	I	G	V	L	I	K	K	G	L	V	E	K	S	G	D	G	.	.	.	.	L
Template Known Secondary structure											T	T	T	S	S													.	.	.	.	.	.		S	T	T	B								T		T	T	S		.	.													T	T	T	S					T	T		.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.																			.	.																								.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.							.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.					.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	S	D	K	G	L	R	L	T	R	R	A	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	T	G	E	A	Q	D	I	I	S	N	A	A	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions