Job Description P76086 Confidence 97.80% Date Thu Jan 5 12:18:38 GMT 2012 Rank 3 Aligned Residues 80 % Identity 23% Template c3ri2B_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, padr-like family; PDBTitle: crystal structure of padr family transcriptional regulator from2 eggerthella lenta dsm 2243 Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80
Predicted Secondary structure																																																																												.	.	.
Query SS confidence																																																																												.	.	.
Query Sequence		L	D	T	F	I	Q	H	A	V	N	A	V	P	V	S	G	T	S	L	I	S	S	L	Y	G	D	S	L	S	H	R	G	G	E	I	W	L	G	S	L	A	A	L	L	E	G	L	G	F	G	E	R	F	V	R	T	A	L	F	R	L	N	K	E	G	W	L	D	V	S	R	I	G	R	.	.	.	R	S	F
Query Conservation																																																																												.	.	.
Alig confidence														.	.	.										.	.	.	.	.	.		.																																											.	.	.
Template Conservation														.	.	.										.	.	.	.	.	.		.
Template Sequence		V	S	S	X	V	L	E	L	R	R	G	T	.	.	.	L	V	X	L	V	L	S	Q	L	.	.	.	.	.	.	R	.	E	P	A	Y	G	Y	A	L	V	K	S	L	A	D	H	G	I	P	I	N	T	L	Y	P	L	X	R	R	L	E	S	Q	G	L	L	A	S	E	W	D	N	G	G	K	P	R	K	Y
Template Known Secondary structure												T	T	.	.	.									T	.	.	.	.	.	.	T	.	S														T	T																T	T	S
Template Predicted Secondary structure														.	.	.										.	.	.	.	.	.		.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.							.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	L	S	D	K	G	L	R	L	T	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	R	T	T	D	E	G	L	R	V	L	R	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions