Job Description P76086 Confidence 96.84% Date Thu Jan 5 12:18:38 GMT 2012 Rank 21 Aligned Residues 71 % Identity 21% Template c3l9fD_ PDB info PDB header:transcription regulator Chain: D: PDB Molecule:putative uncharacterized protein smu.1604c; PDBTitle: the crystal structure of smu.1604c from streptococcus mutans ua159 Resolution 1.80 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.				.	.			.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.																										.	.	.			.	.
Query SS confidence																																				.	.	.	.	.																										.	.	.			.	.
Query Sequence		V	S	G	T	S	L	I	S	S	L	Y	G	D	S	L	S	H	R	G	G	E	I	W	L	G	S	L	A	A	L	L	E	G	L	.	.	.	.	.	G	F	G	E	R	F	V	R	T	A	L	F	R	L	N	K	E	G	W	L	D	V	S	R	I	.	.	.	G	R	.	.	R	S	F	Y	S	L	S	D	K
Query Conservation																																				.	.	.	.	.																										.	.	.			.	.
Alig confidence													.	.	.	.	.	.																		.	.	.	.	.																										.	.	.			.	.
Template Conservation													.	.	.	.	.	.
Template Sequence		M	Q	G	K	D	I	I	L	G	I	L	.	.	.	.	.	.	S	K	K	E	R	S	G	Y	E	I	N	D	I	L	Q	N	Q	L	S	Y	F	Y	D	G	T	Y	G	M	I	Y	P	T	L	R	K	L	E	K	D	G	K	I	T	K	E	V	V	I	Q	D	G	R	P	N	K	N	I	Y	A	I	T	E	S
Template Known Secondary structure													.	.	.	.	.	.	S	S	S														T	S	T	T	T					S	S												T	T	S									T	T	S
Template Predicted Secondary structure													.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.							.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		87	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	R	L	T	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	K	E	L	A	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions