Job Description P76086 Confidence 100.00% Date Thu Jan 5 12:18:38 GMT 2012 Rank 1 Aligned Residues 250 % Identity 19% Template c3l09B_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator2 (jann_22dec04_contig27_revised_gene3569) from jannaschia sp. ccs1 at3 2.81 a resolution Resolution 2.81 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	L	D	T	F	I	Q	H	A	V	N	A	V	P	V	S	G	T	S	L	I	S	S	L	Y	G	D	S	L	S	H	R	G	G	E	I	W	L	G	S	L	A	A	L	L	E	G	L	G	F	G	E	R	F	V	R	T	A	L	F	R	L	N	K	E	G	W	L	D	V	S	R	I	G	R	R	S	F	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	P	I	R	P	L	V	E	A	L	N	A	E	A	P	L	K	L	W	S	V	L	V	T	C	L	G	D	V	S	R	D	G	V	I	E	V	S	G	V	A	L	S	S	F	V	E	R	X	G	L	Q	P	Q	A	X	R	V	A	L	H	R	L	K	R	D	G	W	V	E	S	R	R	L	G	R	V	G	F	H
Template Known Secondary structure			S												S																		T	T																T	T																T	T	S							T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	S	D	K	G	L	R	L	T	R	R	A	E	S	K	I	Y	R	A	E	Q	P	A	W	D	G	K	W	L	L	L	L	S	E	G	L	D	K	S	T	L	A	D	V	K	K	Q	L	I	W	Q	G	F	G	A	L	A	P	S	L	M	A	S	P	S	Q	K	L	A	D	V	Q	T	L	L	H	E	A	G
Query Conservation
Alig confidence																					.	.																		.	.	.																																.	.	.	.	.	.	.	.
Template Conservation																					.	.																		.	.	.																																.	.	.	.	.	.	.	.
Template Sequence		R	L	S	D	S	A	L	T	Q	T	R	A	V	A	G	R	I	Y	G	.	.	P	G	A	G	P	A	P	W	H	L	A	G	X	P	P	D	A	.	.	.	P	D	G	L	S	L	L	P	D	T	L	S	A	T	P	I	S	R	R	F	A	L	I	C	G	P	L	E	D	V	P	.	.	.	.	.	.	.	.
Template Known Secondary structure													T	T					T	S	.	.					S										S	S		.	.	.	T	T	G	G	G	G	S		T	T	S					S	S	S	S						S		G	G	G	S		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.																		.	.	.																																.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	D	N	V	I	C	F	E	A	Q	I	P	L	A	L	S	R	A	A	L	R	A	R	V	E	E	C	W	H	L	T	E	Q	N	A	M	Y	E	T	F	I	Q	S	F	R	P	L	V	P	L	L	K	E	A	A	D	E	L	T	P	E	R	A	F	H	I	Q	L	L	L	I	H	F	Y	R	R	V	V	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																																									.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																									.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	E	D	W	L	L	T	A	P	S	G	R	G	L	P	V	W	V	Q	D	V	V	V	E	A	G	C	E	A	E	F	K	A	L	E	R	T	L	A	Q	I	.	.	.	.	.	.	D	K	V	P	D	T	R	L	E	R	F	T	L	R	V	L	V	L	H	A	W	R	R	L	I	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	T	T	S							S	S														T	T													T		.	.	.	.	.	.		S			S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																									.	.	.	.	.	.
Template SS confidence
										153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.							.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	P	L	L	P	E	E	L	L	P	A	H	W	A	G	H	T	A	R	Q	L	C	I	N	I	Y	Q	R	V	A	P	A	A	L	A	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	S	S	P	A	A	E	A	A	L	G	G	A	R	A	E	I	S	C	R	A	R	V	H	Q	L	L	D	Q	L	G	S	V	E	P	D	W
Template Known Secondary structure			S										T	T
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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