Job Description P25519 Confidence 99.78% Date Thu Jan 5 11:41:54 GMT 2012 Rank 65 Aligned Residues 162 % Identity 17% Template c3r7wC_ PDB info PDB header:protein transport Chain: C: PDB Molecule:gtp-binding protein gtr1; PDBTitle: crystal structure of gtr1p-gtr2p complex Resolution 2.77 Å

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		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		T	V	S	L	V	G	Y	T	N	A	G	K	S	T	L	F	N	R	I	T	E	A	.	R	V	Y	A	A	D	Q	L	F	A	T	L	D	P	T	L	R	R	I	D	V	A	D	V	G	E	T	V	L	A	D	T	V	G	F	I	R	H	L	P	H	D	L	V	A	A	F	K	A	T	L	Q	E	T	R	Q	A
Query Conservation																								.
Alig confidence																								.																																																			.	.	.
Template Conservation																																																																											.	.	.
Template Sequence		K	L	L	L	X	G	R	S	G	S	G	K	S	S	X	R	S	I	I	F	S	N	Y	S	A	F	D	T	R	R	L	G	A	T	I	D	V	E	H	S	H	L	R	F	L	G	N	X	T	L	N	L	W	D	C	G	G	Q	D	V	F	X	E	N	Y	F	T	K	Q	K	D	H	I	.	.	.	F	Q	X	V
Template Known Secondary structure									T	T	S											S				T	T	G	G	G	G						S									T	T	T											S									T	T	T					.	.	.		T	T
Template Predicted Secondary structure																																																																											.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80				.	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.			.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.														.	.	.	.	.	.	340	.	.
Predicted Secondary structure																																.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	L	L	H	V	I	D	A	A	D	V	R	V	Q	E	N	I	E	A	V	N	T	V	L	E	E	I	D	A	.	.	H	E	I	P	T	L	L	V	M	N	K	I	D	M	L	E	D	F	E	P	R	I	D	R	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	K	P	N	R	V	W	L
Query Conservation																																.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	V	L	I	H	V	F	D	V	E	S	T	E	V	L	K	D	I	E	I	F	A	K	A	L	K	Q	L	R	K	Y	S	P	D	A	K	I	F	V	L	L	H	K	X	D	L	V	Q	L	D	K	R	E	E	L	F	Q	I	X	X	K	N	L	S	E	T	S	S	E	F	G	F	P	N	L	I	G	F	P	T
Template Known Secondary structure										T	T		T	T																				T	T										T	T	S	S																						T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	Q	T	G	A	G	I	P	Q	L	F	Q	A	L	T	E	R	L	S	G	E
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		S	I	W	D	.	E	S	L	Y	K	A	W	S	Q	I	V	C	S	L	I	P	N
Template Known Secondary structure			T	T	S	.	T												T	T		S	T
Template Predicted Secondary structure						.
Template SS confidence
		165	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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