Job Description P25519 Confidence 99.81% Date Thu Jan 5 11:41:54 GMT 2012 Rank 52 Aligned Residues 162 % Identity 18% Template c3pqcA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable gtp-binding protein engb; PDBTitle: crystal structure of thermotoga maritima ribosome biogenesis gtp-2 binding protein engb (ysxc/yiha) in complex with gdp Resolution 1.90 Å

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		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	D	V	P	T	V	S	L	V	G	Y	T	N	A	G	K	S	T	L	F	N	R	I	T	E	A	R	V	Y	A	A	D	Q	L	F	A	T	L	D	P	T	L	R	R	I	D	V	A	D	V	G	E	T	V	L	A	D	T	V	G	F	I	R	H	L	P	H	D	L	V	A	A	F	K	A	T	L	Q	E
Query Conservation
Alig confidence																																																.	.	.
Template Conservation																																																.	.	.
Template Sequence		P	P	L	K	G	E	V	A	F	V	G	R	S	N	V	G	K	S	S	L	L	N	A	L	F	N	R	K	I	A	F	V	S	K	T	P	G	K	T	R	S	I	N	F	Y	L	.	.	.	V	N	S	K	Y	Y	F	V	D	L	P	G	Y	G	Y	A	K	V	S	K	K	E	R	M	L	W	K	R	L	V	E
Template Known Secondary structure				T	T								B	T	T	S	S										T	S			S				S	S												.	.	.		T	T	T									B	S	S	S
Template Predicted Secondary structure																																																.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		274	.	.						.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.								.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure					.	.	.	.	.																																																		.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.																																																		.	.	.	.	.	.	.
Query Sequence		T	R	Q	.	.	.	.	.	A	T	L	L	L	H	V	I	D	A	A	D	V	R	V	Q	E	N	I	E	A	V	N	T	V	L	E	E	I	D	A	H	E	I	P	T	L	L	V	M	N	K	I	D	M	L	E	D	F	.	.	.	.	.	.	.	E	P	R	I	D	R	D	E	E	N	K	P	N	R	V	W
Query Conservation					.	.	.	.	.																																																		.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.																												.	.	.	.																			.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.
Template Sequence		D	Y	F	K	N	R	W	S	L	Q	M	V	F	L	L	V	D	G	R	I	P	P	Q	D	S	D	L	M	M	V	E	W	M	K	S	.	.	.	.	L	N	I	P	F	T	I	V	L	T	K	M	D	K	V	K	M	S	E	R	A	K	K	L	E	E	H	R	K	V	F	S	K	Y	G	E	Y	T	I	I	P
Template Known Secondary structure								T	T										T	T	S																.	.	.	.	T	T										G	G	G	S		G	G	G														S	S			S
Template Predicted Secondary structure																																					.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	A	Q	T	G	A	G	I	P	Q	L	F	Q	A	L	T	E	R	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	S	S	V	T	G	E	G	I	S	E	L	L	D	L	I	S	T	L	L	K
Template Known Secondary structure				T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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