Job Description P25519 Confidence 99.74% Date Thu Jan 5 11:41:54 GMT 2012 Rank 83 Aligned Residues 150 % Identity 20% Template c3p27A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:elongation factor 1 alpha-like protein; PDBTitle: crystal structure of a translational gtpase (gdp form) Resolution 2.95 Å

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		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.												.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	V	S	L	V	G	Y	T	N	A	G	K	S	T	L	F	N	R	I	T	E	A	R	V	Y	A	A	D	Q	L	.	.	.	.	.	.	.	.	.	.	.	F	A	T	L	D	P	T	L	R	R	I	D	V	A	D	V	G	E	T	V	L	A	D	T	V	G	F	I	R	H	L	P	H	D	L	V	A	A	F
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.														.														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	F	V	V	L	G	H	V	D	A	G	K	S	T	L	X	G	R	L	L	Y	D	L	N	I	V	N	Q	S	Q	L	R	K	L	Q	R	W	I	X	D	Q	T	V	T	V	S	I	C	T	S	H	F	S	T	.	H	R	A	N	F	T	I	V	D	A	P	G	V	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T	S	S												T	T	S	S		T	T																										.	S	S												.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																								.														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	A	T	L	Q	E	T	R	Q	A	T	L	L	L	H	V	I	D	A	A	D	V	R	V	Q	E	N	I	E	A	V	N	T	V	L	E	E	I	D	A	H	E	I	P	T	L	L	V	M	N	K	I	D	M	L	E	D	F	E	P	R	I	D	R	D	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.
Template Sequence		P	N	A	I	X	G	I	S	Q	A	D	X	A	I	L	C	V	D	C	S	T	F	D	L	D	G	Q	T	K	E	H	X	L	L	A	S	S	L	G	I	H	.	.	N	L	I	I	A	X	N	K	X	D	N	V	D	W	S	Q	Q	R	F	E	E	I	K	S	K	L	L	P	Y	L	V	D	I	G	F	F	E
Template Known Secondary structure												S																											T	T			.	.									G	G	G	G	T	T																				T			G
Template Predicted Secondary structure																																											.	.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300			.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.																			.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	K	P	N	R	V	W	L	S	A	Q	T	G	A	G	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	F	Q	A	L	T	E	R	L	S	G
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	N	I	N	W	V	P	I	S	G	F	S	G	E	G	V	Y	K	I	E	Y	T	D	E	V	R	Q	W	Y	N	G	P	N	L	X	S	T	L	E	N	A	A	F	K	I	S	K
Template Known Secondary structure		G	G								T	T	T		B	T	T	S	S	B								T	T			S
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions