Job Description P25519 Confidence 99.54% Date Thu Jan 5 11:41:54 GMT 2012 Rank 183 Aligned Residues 172 % Identity 23% Template c3mmpC_ PDB info PDB header:transferase Chain: C: PDB Molecule:elongation factor tu 2, elongation factor ts; PDBTitle: structure of the qb replicase, an rna-dependent rna polymerase2 consisting of viral and host proteins Resolution 2.50 Å

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		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	G	R	Q	S	R	I	K	A	D	V	P	T	V	S	L	V	G	Y	T	N	A	G	K	S	T	L	F	N	R	I	T	E	A	R	V	Y	A	A	D	Q	L	F	A	T	L	D	P	T	L	R	R	I	D	V	A	D	V	G	E	T	V	L	A	D	T	V	G	F	I	R	H	L	P	H	D	L	V	A
Query Conservation
Alig confidence																																				.	.	.																	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.																	.	.	.	.														.	.	.	.	.	.	.	.
Template Sequence		E	V	A	A	M	S	K	Q	S	K	P	H	V	N	V	G	T	I	G	H	V	D	H	G	K	T	T	L	T	A	A	I	T	T	.	.	.	V	L	A	K	T	Y	G	G	T	S	H	V	E	Y	D	T	.	.	.	.	P	T	R	H	Y	A	H	V	D	C	P	G	H	.	.	.	.	.	.	.	.	A	D
Template Known Secondary structure																						T	T	S												.	.	.																	.	.	.	.	S	S												.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.	.	.																	.	.	.	.														.	.	.	.	.	.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.				.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.					.	.	.	.	.	.	330	.	.	.	.	.	.									.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure																																																.																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	F	K	A	T	L	Q	E	T	R	Q	A	T	L	L	L	H	V	I	D	A	A	D	V	R	V	Q	E	N	I	E	A	V	N	T	V	L	E	E	I	D	A	H	E	I	P	.	T	L	L	V	M	N	K	I	D	M	L	E	D	F	E	P	R	I	D	R	D	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																.																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.																.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.
Template Sequence		Y	V	K	N	M	I	T	G	A	A	Q	M	D	G	A	I	L	V	V	A	A	T	D	G	P	M	P	.	.	.	.	Q	T	R	E	H	I	L	L	G	R	Q	V	G	V	P	Y	I	I	V	F	L	N	K	C	D	M	V	D	D	E	E	L	L	E	L	V	E	M	E	V	R	E	L	L	S	Q	Y	D	F
Template Known Secondary structure									T	S				S								T	T	T				T	.	.	.	.	T											T	T		S									G	G	G																					T	T	S
Template Predicted Secondary structure																													.	.	.	.
Template SS confidence
		1087	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.					.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.									.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.			.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.																	.	.
Query SS confidence																	.	.	.	.	.	.	.	.																	.	.
Query Sequence		E	E	N	K	P	N	R	V	W	L	S	A	Q	T	G	.	.	.	.	.	.	.	.	A	G	I	P	Q	L	F	Q	A	L	T	E	R	L	S	G	.	.	E	V	A	Q	H	T	L	R	L	P	P	Q	E
Query Conservation																	.	.	.	.	.	.	.	.																	.	.
Alig confidence																	.	.	.	.	.	.	.	.																	.	.
Template Conservation
Template Sequence		P	G	D	D	T	P	I	V	R	G	S	A	L	K	A	L	E	G	D	A	E	W	E	A	K	I	L	E	L	A	G	F	L	D	S	Y	I	P	E	P	E	R	A	I	D	K	P	F	L	L	P	I	E	D
Template Known Secondary structure			G	G	G														T																			S						G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		1163	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions