Return to main results Retrieve Phyre Job Id

Job DescriptionP25519
Confidence99.81%DateThu Jan 5 11:41:54 GMT 2012
Rank49Aligned Residues159
% Identity19%Templatec3lxxA_
PDB info PDB header:immune systemChain: A: PDB Molecule:gtpase imap family member 4; PDBTitle: crystal structure of human gtpase imap family member 4
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   198.200.........210.........220.........230.........240.........250.........260.........270.......
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  PTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQA
Query Conservation    




 









 


  
 
 
  
 


   
 
    
  
 







  

  
      


    
Alig confidence 






















.....















.














..

















Template Conservation    
 
 
  
 






 
   .....    

          .        



   ..                  
Template Sequence  LRIVLVGKTGAGKSATGNSILGR. . . . . KVFHSTKKCEKRSSSW. KETELVVVDTPGIFN. . AETSKEIIRCILLTSPGP
Template Known Secondary structure 

TTSSTS.....

S



S
.TT

S


..TTT

Template Predicted Secondary structure 







.....







.












..




Template SS confidence 















































































   31........40.........50... ......60......... 70.........80.... .....90.........100..
 
   278.280.........290.........300.........310.........320.........330.........340 .........350....
Predicted Secondary structure 

























...





Query SS confidence 






























































. . .













Query Sequence  TLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRV. . . WLSAQTGAGIPQLF
Query Conservation 



 




             

  
     
 


 

 

                  
... 


 

 


 
 
Alig confidence 






























































...













Template Conservation       
                             


 

 
                         
      
  

Template Sequence  HALLLVVPLGRYTEEEHKATEKILKXFGERARSFXILIFTRKDDLPEDIQDLXDIFGDRYCALNNKATGAEQEAQRAQLL
Template Known Secondary structure  STT

SSGGG
GGG

SSS

TT

Template Predicted Secondary structure 




























Template SS confidence 















































































   115....120.........130.........140.........150.........160.........170.........180.........190....
 
   355....360....
Predicted Secondary structure 

Query SS confidence 









Query Sequence  QALTERLSGE
Query Conservation    
 
 
   
Alig confidence 









Template Conservation    
   
  
Template Sequence  GLIQRVVREN
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 









   207..210......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions