Job Description P25519 Confidence 99.19% Date Thu Jan 5 11:41:54 GMT 2012 Rank 253 Aligned Residues 161 % Identity 12% Template c3l2oB_ PDB info PDB header:protein binding/cell cycle Chain: B: PDB Molecule:f-box only protein 4; PDBTitle: structure-based mechanism of dimerization-dependent ubiquitination by2 the scffbx4 ubiquitin ligase Resolution 2.80 Å

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		195	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.			.	.	.	.	.	240	.	.	.	.	.	.				.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure														.												.							.												.	.													.	.	.
Query SS confidence														.												.							.												.	.													.	.	.
Query Sequence		A	D	V	P	T	V	S	L	V	G	Y	T	.	N	A	G	K	S	T	L	F	N	R	I	.	T	E	A	R	V	Y	.	A	A	D	Q	L	F	A	T	L	D	P	.	.	T	L	R	R	I	D	V	A	D	V	G	E	.	.	.	T	V	L	A	D	T	V	G	F	I	R	H	L	P	H	D	L	V	A	A
Query Conservation														.												.							.												.	.													.	.	.
Alig confidence														.												.							.												.	.													.	.	.																		.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		Q	N	E	P	R	F	A	M	F	G	P	G	L	E	E	L	N	T	S	L	V	L	S	L	M	S	S	E	E	L	C	P	T	A	G	L	P	Q	R	Q	I	D	G	I	G	S	G	V	N	F	Q	L	N	N	Q	H	K	F	N	I	L	I	L	Y	S	T	T	R	R	Y	S	V	I	P	Q	I	Q	.	.	.
Template Known Secondary structure												T					S	S	S							T	T		G	G	G							S	T	T	T		S	S	S									T	T	T									S														.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.					.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.																.																					.	.	.	.
Query SS confidence																																						.	.	.	.																.																					.	.	.	.
Query Sequence		F	K	A	T	L	Q	E	T	R	Q	A	T	L	L	L	H	V	I	D	A	A	D	V	R	V	Q	E	N	I	E	A	V	N	T	V	L	.	.	.	.	E	E	I	D	A	H	E	I	P	T	L	L	V	M	N	.	K	I	D	M	L	E	D	F	E	P	R	I	D	R	D	E	E	N	K	P	.	.	.	.
Query Conservation																																						.	.	.	.																.																					.	.	.	.
Alig confidence		.	.	.	.	.																																.	.	.	.																.																					.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	K	V	C	E	V	V	D	G	F	I	Y	V	A	N	A	E	A	H	K	R	H	E	W	Q	D	E	F	S	H	I	M	A	M	T	D	P	A	F	G	S	S	G	R	P	L	L	V	L	S	C	I	S	Q	G	D	V	K	R	M	P	C	F	Y	L	A	H	E	L	H	L	N	L	L	N	H
Template Known Secondary structure		.	.	.	.	.							S							B		B	T	T																							T	T										S	S	T	T	S		B										T	T	G	G	G	G		S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
				338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	N	R	V	W	L	S	A	Q	T	G	A	G	I	P	Q	L	F	Q	A	L	T	E	R	L	S	G
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		P	W	L	V	Q	D	T	E	A	E	T	L	T	G	F	L	N	G	I	E	W	I	L	E	E	V	E	S
Template Known Secondary structure										T	T	T		T	T												S
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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