Job Description P25519 Confidence 99.89% Date Thu Jan 5 11:41:54 GMT 2012 Rank 25 Aligned Residues 153 % Identity 20% Template c3izyP_ PDB info PDB header:rna, ribosomal protein Chain: P: PDB Molecule:translation initiation factor if-2, mitochondrial; PDBTitle: mammalian mitochondrial translation initiation factor 2 Resolution 10.80 Å

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		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	V	S	L	V	G	Y	T	N	A	G	K	S	T	L	F	N	R	I	T	E	A	R	V	Y	A	A	D	Q	L	F	A	T	L	D	P	T	L	R	R	I	D	V	A	D	V	G	E	T	V	L	A	D	T	V	G	F	I	R	H	L	P	H	D	L	V	A	A	F	K	A	T	L	Q	E	T	R	Q	A
Query Conservation
Alig confidence																																																																						.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.
Template Sequence		P	V	V	T	I	M	G	H	V	D	H	G	K	T	T	L	L	D	K	L	R	K	T	Q	V	A	A	M	E	A	G	G	I	T	Q	H	I	G	A	F	L	V	S	L	P	S	G	E	K	I	T	F	L	D	T	P	G	H	A	A	F	S	A	M	R	A	R	G	.	.	.	.	.	.	.	.	T	Q	V	T
Template Known Secondary structure			B						S	T	T	T	T																S	S	S			B				T	T	S			B		S	S		S	S			B					S	S	S			T	T	T	S	B	B	S	S	.	.	.	.	.	.	.	.	S	B	S	B
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.									.	250	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.											.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	L	L	H	V	I	D	A	A	D	V	R	V	Q	E	N	I	E	A	V	N	T	V	L	E	E	I	D	A	H	E	I	P	T	L	L	V	M	N	K	I	D	M	L	E	D	F	E	P	R	I	D	R	D	E	E	N	.	.	.	.	.	.	.	.	.	.	K	P	N	R	V	W	L	S	A	Q	T	G
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.																																							.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		D	I	V	I	L	V	V	A	A	D	D	G	V	M	K	Q	.	.	.	.	T	V	E	S	I	Q	H	A	K	D	A	H	V	P	I	V	L	A	I	N	K	C	D	K	A	E	A	D	P	E	K	V	K	K	E	L	L	A	Y	D	V	V	C	E	D	Y	G	G	D	V	Q	A	V	H	V	S	A	L	T	G
Template Known Secondary structure		S	S						B	S	S	S						.	.	.	.										T	T	T								B	S	G	G	G	T	T	T	S			S	S	S	S					T	T	S					S	S	S	S								S	S	S	S
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.					.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	I	P	Q	L	F	Q	A	L	T	E	R	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	N	M	M	A	L	A	E	A	T	I	A	L	A	E
Template Known Secondary structure			S	S												T
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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