Return to main results Retrieve Phyre Job Id

Job DescriptionP25519
Confidence99.92%DateThu Jan 5 11:41:54 GMT 2012
Rank17Aligned Residues163
% Identity22%Templatec3i8sC_
PDB info PDB header:transport proteinChain: C: PDB Molecule:ferrous iron transport protein b; PDBTitle: structure of the cytosolic domain of e. coli feob, nucleotide-free2 form
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   198.200.........210.........220.........230.........240.........250..... ....260.........270...
Predicted Secondary structure 




















....



Query SS confidence 

























































. . . .

















Query Sequence  PTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGF. . . . IRHLPHDLVAAFKATLQE
Query Conservation    




 









 


  
 
 
  
 


   
 
    
  
 






....
  

  
      


 
Alig confidence 











































.












....

















Template Conservation    
 
 
    






 
 
           
          .      





                       
Template Sequence  LTIGLIGNPNSGKTTLFNQLTGSRQRVGNWAGVTVERKEGQFST. TDHQVTLVDLPGTYSLTTISSQTSLDEQIACHYIL
Template Known Secondary structure 
TTSSTT

TTSS

.SS




S
S

SSS


Template Predicted Secondary structure 















.














Template SS confidence 















































































   4.....10.........20.........30.........40....... ..50.........60.........70.........80..
 
   274.....280.........290.........300.........310.........320.... .....330.........340.........350
Predicted Secondary structure 





















...










Query SS confidence 


















































. . .

























Query Sequence  TRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLED. . . FEPRIDRDEENKPNRVWLSAQTGAGI
Query Conservation     




 




             

  
     
 


 

 

   ...               
 


 

 

Alig confidence 


















......

























...

























Template Conservation        

 
 
       ......                



 
             
                 

Template Sequence  SGDADLLINVVDASNLERN. . . . . . LYLTLQLLELGIPCIVALNMLDIAEKQNIRIEIDALSARLGCPVIPLVSTRGRGI
Template Known Secondary structure  T

SGGG......TT


TT

B
TS



GGG
Template Predicted Secondary structure 










......





















Template SS confidence 















































































   83......90.........100. ........110.........120.........130.........140.........150......
 
   351........360.......
Predicted Secondary structure 


Query SS confidence 
















Query Sequence  PQLFQALTERLSGEVAQ
Query Conservation 
 
   
 
 
      
Alig confidence 
















Template Conservation    
   
          
Template Sequence  EALKLAIDRYKANENVE
Template Known Secondary structure 







Template Predicted Secondary structure 




Template SS confidence 
















   157..160.........170...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions