Return to main results Retrieve Phyre Job Id

Job DescriptionP25519
Confidence100.00%DateThu Jan 5 11:41:54 GMT 2012
Rank4Aligned Residues234
% Identity26%Templatec3gehA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:trna modification gtpase mnme; PDBTitle: crystal structure of mnme from nostoc in complex with gdp, folinic2 acid and zn
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   119120.........130.........140.. .......150.........160.........170.........180.........190...
Predicted Secondary structure 




.....













Query SS confidence 























. . . . .


















































Query Sequence  EGKLQVELAQLRHLATRLVRGWTH. . . . . LERQKGGIGLRGPGETQLETDRRLLRNRIVQIQSRLERVEKQREQGRQSRI
Query Conservation 








 
 
  


      .....           
 

   
  

 
  

  
  

      
   
  
 
Alig confidence 























.....









...





































Template Conservation        
   
 
        

  
    
 


 


... 

        
   
  
   
  

         
 
Template Sequence  PQAAQTALAGLQGKLAHPIRQLRANCLDILAEIEARIDF. . . EEDLPPLDDEAIISDIENIAAEISQLLATKDKGELLRT
Template Known Secondary structure  TTTTTS...SSSS



TTTTTT
Template Predicted Secondary structure 





...





Template SS confidence 















































































   144.....150.........160.........170.........180.. .......190.........200.........210.........220
 
   194.....200.........210.........220.. .......230.........240.........250.........260.........270..
Predicted Secondary structure 













.














Query SS confidence 




























.

















































Query Sequence  KADVPTVSLVGYTNAGKSTLFNRITEARV. YAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQ
Query Conservation        




 









 


  
. 
 
  
 


   
 
    
  
 







  

  
      


Alig confidence 
...
























.


















.











..................
Template Conservation 
...  
 


 









 
 
   



  





        . 
    
 



..................
Template Sequence  G. . . LKVAIVGRPNVGKSSLLNAWSQSDRAIVTDLPGTTRDVVESQLVV. GGIPVQVLDQAA. . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
...
TTSSBS

S

TT

.TT




..................
Template Predicted Secondary structure 
...





















.



..................
Template SS confidence 















































































   221 ........230.........240.........250.........260...... ...270........
 
   273......280.........290.........300.........310.........320.........330.........340.........350..
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  ETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQ
Query Conservation      




 




             

  
     
 


 

 

                  
 


 

 


 
Alig confidence  ..


























......












































Template Conservation  ..  




 
 
 
              ......     
 
 

 

                 

 


    

  
Template Sequence  . . NTADLVLLTIDAATGWTTGDQEIYEQV. . . . . . KHRPLILVMNKIDLVEKQLITSLEYPENITQIVHTAAAQKQGIDS
Template Known Secondary structure  ..
S
STTT
S
......TTS

TTSS
GGGSTT



TT


BTTTTBS
Template Predicted Secondary structure  ..







......




















Template SS confidence 















































































   299300.........310.........320..... ....330.........340.........350.........360.........370
 
   353......360.........370.........380.....
Predicted Secondary structure 






Query SS confidence 
































Query Sequence  LFQALTERLSGEVAQHTLRLPPQEGRLRSRFYQ
Query Conservation 
   
 
 
        
 

         
  
Alig confidence 
































Template Conservation 
   
   
                
    
  
Template Sequence  LETAILEIVQTGKVQAADMDLAINQRQAAALTQ
Template Known Secondary structure  TTSSSSS

SS



Template Predicted Secondary structure 









Template SS confidence 
































   371........380.........390.........400...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions