Job Description P25519 Confidence 99.43% Date Thu Jan 5 11:41:54 GMT 2012 Rank 230 Aligned Residues 170 % Identity 18% Template c3clvA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:rab5 protein, putative; PDBTitle: crystal structure of rab5a from plasmodium falciparum,2 pfb0500c Resolution 1.89 Å

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		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	D	V	P	T	V	S	L	V	G	Y	T	N	A	G	K	S	T	L	F	N	R	I	T	E	A	R	V	Y	A	A	D	Q	L	F	A	T	L	D	P	T	L	R	R	I	D	V	A	D	V	G	E	T	V	L	A	D	T	V	G	F	I	R	H	L	P	H	D	L	V	A	A	F	K	A	T	L	Q	E
Query Conservation
Alig confidence																																																		.
Template Conservation																																																		.
Template Sequence		K	K	S	S	Y	K	T	V	L	L	G	E	S	S	V	G	K	S	S	I	V	L	R	L	T	K	D	T	F	H	E	N	T	N	T	T	I	G	A	S	F	C	T	Y	V	V	N	L	.	N	D	N	Y	N	E	N	L	C	N	I	K	F	D	I	W	D	T	A	G	Q	E	R	Y	A	S	I	V	P	L	Y
Template Known Secondary structure				S	S									T	T	S	S											S				S	S						S										T	.	T					T	T	T											T	T	G	G	G		T	T	T
Template Predicted Secondary structure																																																		.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.			.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure																																																		.	.
Query SS confidence																																																		.	.
Query Sequence		T	R	Q	A	T	L	L	L	H	V	I	D	A	A	D	V	R	V	Q	E	N	I	E	A	V	N	T	V	L	E	E	I	D	A	H	E	I	P	T	L	L	V	M	N	K	I	D	M	.	.	L	E	D	F	E	P	R	I	D	R	D	E	E	N	K	P	N	R	V	W	L	S	A	Q	T	G	A	G	I	P
Query Conservation																																																		.	.
Alig confidence																																		.	.															.	.
Template Conservation																																		.	.
Template Sequence		Y	R	G	A	T	C	A	I	V	V	F	D	I	S	N	S	N	T	L	D	R	A	K	T	W	V	N	Q	L	K	I	S	.	.	S	N	Y	I	I	I	L	V	A	N	K	I	D	K	N	F	Q	V	D	I	L	E	V	Q	K	Y	A	Q	D	N	N	L	L	F	I	Q	T	S	A	K	T	G	T	N	I	K
Template Known Secondary structure			T	T		S								T	T																			.	.	S											T	T					S												T	T								T	T	T		T	T
Template Predicted Secondary structure																																		.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	F	Q	A	L	T	E	R	L	S	G	E	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	F	Y	M	L	A	E	E	I	Y	K	N	I	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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