Job Description P25519 Confidence 99.69% Date Thu Jan 5 11:41:54 GMT 2012 Rank 96 Aligned Residues 167 % Identity 17% Template c3c5hA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:glucocorticoid receptor dna-binding factor 1; PDBTitle: crystal structure of the ras homolog domain of human grlf12 (p190rhogap) Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		195	.	.	.	.	200	.	.	.	.	.	.	.	.										.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.																	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.												.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.												.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	V	P	T	V	S	L	V	G	Y	T	N	A	.	.	.	.	.	.	.	.	.	G	K	S	T	L	F	N	R	I	T	E	.	.	A	R	V	Y	A	A	D	Q	L	F	A	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	T	L	R	R	I	D	V	A	D	V	G	E	T
Query Conservation																.	.	.	.	.	.	.	.	.												.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.												.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																																																																													.
Template Sequence		Q	G	T	Y	N	I	S	V	V	G	L	S	G	T	E	K	E	K	G	Q	C	G	I	G	K	S	C	L	C	N	R	F	V	R	P	S	A	D	E	F	H	L	D	H	T	S	V	L	S	T	S	D	F	G	G	R	V	V	N	N	D	H	F	L	Y	W	G	E	V	S	K	M	H	I	V	.	E	Q	T	E
Template Known Secondary structure			S									S				T	T	T	T	T	T				S												S	T	T	T			S												T	S	T	T	T	T	T		S														.
Template Predicted Secondary structure																																																																													.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270																														.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	A	D	T	V	G	F	I	R	H	L	P	H	D	L	V	A	A	F	K	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Q	E	T	R	Q	A	T	L	L	L	H	V	I	D	A	A	D	V	R	V	Q	E	N	I	E	A	V
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																																																																								.
Template Sequence		F	I	D	D	Q	T	F	Q	P	H	R	S	T	A	L	Q	P	Y	I	K	R	A	A	A	T	K	L	A	S	A	E	K	L	M	Y	F	C	T	D	Q	L	G	L	E	Q	D	F	E	Q	K	Q	M	P	D	G	K	L	L	V	D	G	F	L	L	G	I	D	V	S	R	.	N	F	D	D	Q	L	K	F	V
Template Known Secondary structure					T	T	T		S	B	T	T	G	G	G									T		S					T	T		B					G	G	G	T	T		G	G	G	S				B		G	G	G														B		.
Template Predicted Secondary structure																																																																								.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.				.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure																												.	.	.
Query SS confidence																												.	.	.
Query Sequence		N	T	V	L	E	E	I	D	A	H	E	I	P	T	L	L	V	M	N	K	I	D	M	L	E	D	.	.	.	F	E	P	R	I	D	R	D	E	E	N	K	P	N	R	V	W	L	S	A	Q	T	G	A	G	I	P	Q	L	F	Q	A	L	T	E	R	L	S	G
Query Conservation																												.	.	.
Alig confidence																												.	.	.
Template Conservation
Template Sequence		S	N	L	Y	N	Q	L	A	K	T	K	K	P	I	V	V	V	L	T	K	C	D	E	G	V	E	R	Y	I	R	D	A	H	T	F	A	L	S	K	K	N	L	Q	V	V	E	T	S	A	R	S	N	V	N	V	D	L	A	F	S	T	L	V	Q	L	I	D	K
Template Known Secondary structure											T	T										G	G	G	B														T	S	S	S							B	T	T	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions