Return to main results Retrieve Phyre Job Id

Job DescriptionP25519
Confidence99.93%DateThu Jan 5 11:41:54 GMT 2012
Rank13Aligned Residues170
% Identity23%Templatec3a1vB_
PDB info PDB header:transport proteinChain: B: PDB Molecule:iron(ii) transport protein b; PDBTitle: crystal structue of the cytosolic domain of t. maritima feob2 iron iransporter in apo form
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   197..200.........210.........220.........230.........240.........250.........260.........270......
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  VPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQ
Query Conservation     




 









 


  
 
 
  
 


   
 
    
  
 







  

  
      


    
Alig confidence 







































..





































Template Conservation     
 


    






 
      

    

     ..        
 





                      
Template Sequence  MVKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKE. . VFTYKGYTINLIDLPGTYSLGYSSIDEKIARDYLLKGD
Template Known Secondary structure 


TTSSTT


STTS
S
..
TT



SS

SSSS
Template Predicted Secondary structure 
















..











Template SS confidence 















































































   16...20.........30.........40.........50..... ....60.........70.........80.........90...
 
   277..280.........290.........300.........310.........320.........330.........340.........350......
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  ATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQA
Query Conservation 




 




             

  
     
 


 

 

                  
 


 

 


 
   
Alig confidence 













......






































..


















Template Conservation                ......                
 
 

 
               ..     

     
  
   
Template Sequence  ADLVILVADSVNPE. . . . . . QSLYLLLEILEMEKKVILAMTKKTGMKIDRYELQKHLGI. . PVVFTSSVTGEGLEELKEK
Template Known Secondary structure 
S

TT

......TT





TT





S..



TTT

S
Template Predicted Secondary structure 







......













..








Template SS confidence 















































































   95....100........ .110.........120.........130.........140....... ..150.........160......
 
   357..360.........370......
Predicted Secondary structure 






Query SS confidence 



















Query Sequence  LTERLSGEVAQHTLRLPPQE
Query Conservation 
 
 
        
 

   
Alig confidence 



















Template Conservation 
                   
Template Sequence  IVEYAQKNTILHRMILDYGE
Template Known Secondary structure 

S
S







Template Predicted Secondary structure 












Template SS confidence 



















   172.......180.........190.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions