Job Description P25519 Confidence 99.46% Date Thu Jan 5 11:41:54 GMT 2012 Rank 223 Aligned Residues 142 % Identity 17% Template c2zejA_ PDB info PDB header:transferase Chain: A: PDB Molecule:leucine-rich repeat kinase 2; PDBTitle: structure of the roc domain from the parkinson's disease-associated2 leucine-rich repeat kinase 2 reveals a dimeric gtpase Resolution 2.00 Å

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		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	V	S	L	V	G	Y	T	N	A	G	K	S	T	L	F	N	R	I	T	E	A	R	V	Y	A	A	D	Q	L	F	A	T	L	D	P	T	L	R	R	I	D	V	A	D	V	G	E	T	V	L	A	D	T	V	G	F	I	R	H	L	P	H	D	L	V	A	A	F	K	A	T	L	Q	E	T	R	Q	A
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.														.	.	.											.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.														.	.	.											.	.	.	.	.	.	.	.
Template Sequence		X	K	L	X	I	V	G	N	T	G	S	G	K	T	T	L	L	Q	Q	L	.	.	.	.	.	.	.	.	.	.	.	X	K	T	V	G	I	D	V	K	D	W	P	I	.	.	.	L	V	L	N	V	W	D	F	A	G	.	.	.	.	.	.	.	.	R	E	E	F	Y	S	T	H	P	H	F	X	T	Q	R
Template Known Secondary structure								S		T	T	S	S									.	.	.	.	.	.	.	.	.	.	.	T				S									.	.	.										S	.	.	.	.	.	.	.	.						T	T	S							S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.														.	.	.											.	.	.	.	.	.	.	.
Template SS confidence
		1335	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.												.	.	.	.	.	1360	.	.	.	.	.	.	.				.	.	1370	.	.	.	.	.	.	.									.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.									.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.
Query Sequence		T	L	L	L	H	V	I	D	A	A	D	V	R	V	Q	E	N	I	E	A	V	N	T	V	L	E	E	I	D	A	H	E	I	P	T	L	L	V	M	N	K	I	D	M	L	E	D	F	E	P	R	I	D	R	D	E	E	.	.	.	.	.	.	.	.	N	K	P	N	R	V	W	L	S	A	Q	T	G	A	G
Query Conservation																																																											.	.	.	.	.	.	.	.
Alig confidence																																																											.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	Y	L	A	V	Y	D	L	S	K	G	Q	A	E	V	D	A	X	K	P	W	L	F	N	I	K	A	R	A	S	S	S	P	V	I	L	V	G	T	H	L	D	V	S	D	E	K	Q	R	K	A	C	X	S	K	I	T	K	E	L	L	N	K	R	G	F	P	A	I	R	D	Y	H	F	V	N	A	T	E
Template Known Secondary structure										G	G	G							T													T	T										G	G	G																	T	T	T		T	T	S											T	T	S
Template Predicted Secondary structure
Template SS confidence
		1413	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.
		350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	Q	L	F	Q	A	L	T	E	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	S	D	A	L	A	K	L	R	K	T	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1493	.	.	.	.	.	.	1500	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions