Job Description P25519 Confidence 98.83% Date Thu Jan 5 11:41:54 GMT 2012 Rank 264 Aligned Residues 123 % Identity 21% Template c2yc2D_ PDB info PDB header:transport protein Chain: D: PDB Molecule:small rab-related gtpase; PDBTitle: intraflagellar transport complex 25-27 from chlamydomonas Resolution 2.59 Å

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		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.				.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																			.	.	.																												.
Query SS confidence																			.	.	.																												.
Query Sequence		L	F	A	T	L	D	P	T	L	R	R	I	D	V	A	D	V	.	.	.	G	E	T	V	L	A	D	T	V	G	F	I	R	H	L	P	H	D	L	V	A	A	F	K	A	T	L	.	Q	E	T	R	Q	A	T	L	L	L	H	V	I	D	A	A	D	V	R	V	Q	E	N	I	E	A	V	N	T	V	L	E
Query Conservation																			.	.	.																												.
Alig confidence																			.	.	.											.	.	.	.	.	.	.	.	.									.
Template Conservation																																.	.	.	.	.	.	.	.	.
Template Sequence		L	R	C	K	V	A	V	V	V	A	P	V	T	I	P	D	T	T	V	S	V	E	L	F	L	L	D	T	A	G	.	.	.	.	.	.	.	.	.	S	D	L	Y	K	E	Q	I	S	Q	Y	W	N	G	V	Y	Y	A	I	L	V	F	D	V	S	S	M	E	S	F	E	S	C	K	A	W	F	E	L	L	K
Template Known Secondary structure																T	T	S	S										T	T	T	.	.	.	.	.	.	.	.	.	T								S	T	T													T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.										.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		304	.				.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.			.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure				.	.	.																																											.	.
Query SS confidence				.	.	.																																											.	.
Query Sequence		E	I	.	.	.	D	A	H	E	I	P	T	L	L	V	M	N	K	I	D	M	L	E	D	F	E	P	R	I	D	R	D	E	E	N	K	P	N	R	V	W	L	S	A	Q	T	G	.	.	A	G	I	P	Q	L	F	Q	A	L	T	E	R	L
Query Conservation				.	.	.																																											.	.
Alig confidence				.	.	.																	.	.																									.	.
Template Conservation																							.	.
Template Sequence		S	A	R	P	D	R	E	R	P	L	R	A	V	L	V	A	N	K	T	Q	V	.	.	R	L	D	M	A	Q	D	W	A	T	T	N	T	L	D	F	F	D	V	S	A	A	D	A	P	F	L	S	I	A	T	T	F	Y	R	N	Y	E	D	K
Template Known Secondary structure					S		T	T	S														.	.													T
Template Predicted Secondary structure																							.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions