Job Description P25519 Confidence 99.63% Date Thu Jan 5 11:41:54 GMT 2012 Rank 129 Aligned Residues 155 % Identity 21% Template c2x2fD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:dynamin-1; PDBTitle: dynamin 1 gtpase dimer, short axis form Resolution 2.00 Å

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		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	E	K	Q	R	E	Q	G	R	Q	S	R	I	K	A	D	V	P	T	V	S	L	V	G	Y	T	N	A	G	K	S	T	L	F	N	R	I	T	E	A	R	V	Y	A	A	D	Q	L	F	A	T	L	D	P	T	L	R	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	P	L	V	N	R	L	Q	D	A	F	S	A	D	L	D	L	P	Q	I	A	V	V	G	G	Q	S	A	G	K	S	S	V	L	E	N	F	V	G	R	D	F	L	P	R	G	S	G	I	V	T	R	R	P	L	V	L	Q	L	V	N	A	T	T	E	Y	A	E	F	L	H	C	K	G	K	K	F	T	D	F
Template Known Secondary structure																										B	T	T	S	S							T	T	T		S	S		S				S	S	S				S										S	S						T	T	S	T	T			B
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
																															239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.							.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	V	A	D	V	G	E	T	V	L	A	D	T	V	G	F	I	R	H	L	P	H	D	L	V	A	A	F	K	A	T	L	Q	E	.	.	.	.	.	.	T	R	Q	A	T	L	L	L	H	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Template Conservation
Template Sequence		E	E	V	R	L	E	I	E	A	E	T	D	R	V	T	G	T	N	K	G	I	S	P	V	P	I	N	L	R	V	Y	S	P	H	V	L	N	L	T	L	V	D	L	P	G	X	T	K	V	P	V	G	D	Q	P	P	D	I	E	F	Q	I	R	D	X	L	X	Q	F	V	T	K	E	N	C	L	I	L	A	V
Template Known Secondary structure																		S	S	S					S									T	T			S									B		S	S			T	T			T	T														T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	A	A	D	V	R	V	Q	E	N	I	E	A	V	N	T	V	L	E	E	I	D	A	H	E	I	P	T	L	L	V	M	N	K	I	D	M	L	E	D	F	E	P	R	I	D	R	D	E	E	N	K	P	N
Query Conservation
Alig confidence													.	.	.
Template Conservation													.	.	.
Template Sequence		S	P	A	N	S	D	L	A	N	S	D	.	.	.	A	L	K	V	A	K	E	V	D	P	Q	G	Q	R	T	I	G	V	I	T	K	L	D	L	X	D	E	G	T	D	A	R	D	V	L	E	N	K	L	L	P
Template Known Secondary structure				T	T	S		G	G	G			.	.	.										T	T		S	S								G	G	G	S		T	T								T	T		S	S
Template Predicted Secondary structure													.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.				.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions