Job Description P25519 Confidence 98.74% Date Thu Jan 5 11:41:54 GMT 2012 Rank 270 Aligned Residues 190 % Identity 17% Template c2qy9A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:cell division protein ftsy; PDBTitle: structure of the ng+1 construct of the e. coli srp receptor2 ftsy Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170													.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.
Query Sequence		G	P	G	E	T	Q	L	E	T	D	R	R	L	L	R	N	R	.	.	.	.	.	.	.	.	.	.	.	.	I	V	Q	I	Q	S	R	L	E	R	V	E	K	Q	R	E	Q	G	R	Q	S	R	I	K	A	D	V	P	T	V	S	L	V	G	Y	T	N	A	G	K	S	T	L	F	N	R	I	T	.	.	.
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.																												.																					.	.	.
Template Conservation																																																										.
Template Sequence		D	V	G	V	E	T	T	R	K	I	I	T	N	L	T	E	G	A	S	R	K	Q	L	R	D	A	E	A	L	Y	G	L	L	K	E	E	M	G	E	I	L	A	K	V	D	E	P	L	N	V	E	G	K	A	P	F	.	V	I	L	M	V	G	V	N	G	V	G	K	T	T	T	I	G	K	L	A	R	Q	F
Template Known Secondary structure		T																				T	T			B	G	G	G															T	T								S		T	T		.								T	T	S
Template Predicted Secondary structure																																																										.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
																																219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	R	V	Y	A	A	D	Q	L	F	A	T	L	D	P	T	L	R	R	I	D	V	.	.	A	D	V	G	E	T	V	L	A	D	T	V	G	F	I	R	H	L	P	H	D	L	V	A	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.														.
Template Conservation																																																																						.
Template Sequence		E	Q	Q	G	K	S	V	M	L	A	A	G	D	T	F	R	A	A	A	V	E	Q	L	Q	V	W	G	Q	R	N	N	I	P	V	I	A	Q	H	T	G	A	D	S	A	S	V	I	F	D	A	I	Q	A	A	K	A	R	N	I	D	V	L	I	A	D	T	A	G	.	R	L	Q	N	K	S	H	L	M	E	E
Template Known Secondary structure			T	T	T										T	T															T	T							S	T	T																	T	T		S									.		G	G	G
Template Predicted Secondary structure																																																																						.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.						.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure												.	.	.	.	.
Query SS confidence												.	.	.	.	.
Query Sequence		F	K	A	T	L	Q	E	T	R	Q	.	.	.	.	.	A	T	L	L	L	H	V	I	D	A	A	D	V	R	V	Q	E	N	I	E	A	V	N	T	V	L	E	E	I	D	A	H	E	I	P	T	L	L	V	M	N	K	I	D	M	L	E	D	F	E	P	R	I	D	R	D	E	E	N	K	P	N	R	V	W
Query Conservation												.	.	.	.	.
Alig confidence												.	.	.	.	.													.	.																			.	.	.	.
Template Conservation																													.	.																			.	.	.	.
Template Sequence		L	K	K	I	V	R	V	M	K	K	L	D	V	E	A	P	H	E	V	M	L	T	I	D	A	S	T	.	.	G	Q	N	A	V	S	Q	A	K	L	F	H	E	A	V	G	L	T	.	.	.	.	G	I	T	L	T	K	L	D	G	T	A	K	G	G	V	I	F	S	V	A	D	Q	F	G	I	P	I	R	Y
Template Known Secondary structure										T	T	T		T	T			S								G	G	G	.	.	T														S				.	.	.	.								T	T		T	T	T	T
Template Predicted Secondary structure																													.	.																			.	.	.	.
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.					.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
		342	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	A	Q	T	G	A	G	I	P	Q	L
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		I	G	.	.	V	G	E	R	I	E	D	L
Template Known Secondary structure				.	.		S	S	S	G	G	G
Template Predicted Secondary structure				.	.
Template SS confidence
		471	.			.	.	.	.	.	.	.	480

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions