Job Description P25519 Confidence 100.00% Date Thu Jan 5 11:41:54 GMT 2012 Rank 1 Aligned Residues 289 % Identity 30% Template c2qthA_ PDB info PDB header:nucleotide binding protein Chain: A: PDB Molecule:gtp-binding protein; PDBTitle: crystal structure of a gtp-binding protein from the2 hyperthermophilic archaeon sulfolobus solfataricus in3 complex with gdp Resolution 2.00 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		M	E	D	L	Q	E	F	E	S	L	V	S	S	A	G	V	E	A	L	Q	V	I	T	G	S	R	K	A	P	H	P	K	Y	F	V	G	E	G	K	A	V	E	I	A	E	A	V	K	A	T	G	A	S	V	V	L	F	D	H	A	L	S	P	A	Q	E	R	N	L	E	R	L	C	.	E	C	R	V	I	D
Query Conservation																																																																											.
Alig confidence																											.																			.	.	.																											.
Template Conservation																											.																			.	.	.
Template Sequence		K	E	F	E	E	E	A	I	A	L	V	E	G	A	N	Y	K	V	T	S	I	Y	K	L	P	.	K	S	P	N	V	K	F	Y	I	Q	Y	D	K	L	Q	Q	I	K	.	.	.	N	D	E	E	I	S	T	L	I	I	F	E	Q	L	K	P	R	H	F	I	N	I	R	R	E	L	K	G	K	E	V	L	D
Template Known Secondary structure		T	T	T											T	T											.	S	S		B	T	T	T	B	S										.	.	.	T		T	T							S	S															T	T
Template Predicted Secondary structure																											.																			.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	G	L	I	L	D	I	F	A	Q	R	A	R	T	H	E	G	K	L	Q	V	E	L	A	Q	L	R	H	L	A	T	R	L	V	R	G	W	T	H	L	E	R	Q	K	G	G	I	G	L	R	G	P	G	E	T	Q	L	E	T	D	R	R	L	L	R	N	R	I	V	Q	I	Q	S	R	L	E	R	V	E
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	L	L	L	L	E	I	F	A	L	H	A	G	S	K	E	A	K	M	Q	I	E	L	A	R	L	K	Y	E	L	P	I	I	K	E	T	S	T	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	F	Y	K	R	R	I	N	K	L	M	K	E	L	E	S	I	K
Template Known Secondary structure																S																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.																							.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	R	E	Q	G	R	Q	S	R	I	K	A	D	V	P	T	V	S	L	V	G	Y	T	N	A	G	K	S	T	L	F	N	R	I	T	E	A	R	V	Y	A	A	D	Q	L	F	A	T	L	D	P	T	L	R	R	I	D	V	A	D	V	G	E	T	V	L	A	D	T	V	G	F	I	R	H	L	P	H	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.												.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	I	I	P	S	I	G	I	V	G	Y	T	N	S	G	K	T	S	L	F	N	S	L	T	G	.	.	.	.	.	.	.	.	.	.	.	L	M	S	P	K	R	Y	A	I	P	I	.	N	N	R	K	I	M	L	V	D	T	V	G	F	I	R	G	I	P	P	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.										B	T	T	S	S										T	.	.	.	.	.	.	.	.	.	.	.				S								.	T	T											B		S	S			G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.												.
Template SS confidence
															165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.												.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.			290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure																													.	.																																														.	.	.	.	.	.
Query SS confidence																													.	.																																														.	.	.	.	.	.
Query Sequence		L	V	A	A	F	K	A	T	L	Q	E	T	R	Q	A	T	L	L	L	H	V	I	D	A	A	D	V	.	.	R	V	Q	E	N	I	E	A	V	N	T	V	L	E	E	I	D	A	H	E	I	P	T	L	L	V	M	N	K	I	D	M	L	E	D	F	E	P	R	I	D	R	D	E	E	.	.	.	.	.	.
Query Conservation																													.	.																																														.	.	.	.	.	.
Alig confidence																													.	.																																														.	.	.	.	.	.
Template Conservation
Template Sequence		I	V	D	A	F	F	V	T	L	S	E	A	K	Y	S	D	A	L	I	L	V	I	D	S	T	F	S	E	N	L	L	I	E	T	L	Q	S	S	F	E	I	L	R	E	I	G	V	S	G	K	P	I	L	V	T	L	N	K	I	D	K	I	N	G	D	L	Y	K	K	L	D	L	V	E	K	L	S	K	E	L
Template Known Secondary structure		G										G	G	G	G	S	S								T	T	S																				T			S										G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
				335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	N	K	P	N	R	V	W	L	S	A	Q	T	G	A	G	I	P	Q	L	F	Q	A	L	T	E	R	L	S	G
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		Y	S	P	I	F	D	V	I	P	I	S	A	L	K	R	T	N	L	E	L	L	R	D	K	I	Y	Q	L	A	T	Q
Template Known Secondary structure			S									B	T	T	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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