Job Description P25519 Confidence 99.48% Date Thu Jan 5 11:41:54 GMT 2012 Rank 213 Aligned Residues 150 % Identity 21% Template c2p5sB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:ras and ef-hand domain containing; PDBTitle: rab domain of human rasef in complex with gdp Resolution 2.15 Å

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		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	V	S	L	V	G	Y	T	N	A	G	K	S	T	L	F	N	R	I	T	E	A	R	V	Y	A	A	D	Q	L	F	A	T	L	D	P	T	L	R	R	I	D	V	A	D	V	G	E	T	V	L	A	D	T	V	G	F	I	R	H	L	P	H	D	L	V	A	A	F	K	A	T	L	Q	E	T	R	Q	A
Query Conservation
Alig confidence																										.	.	.	.	.	.	.														.																										.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.														.																										.	.	.	.	.	.
Template Sequence		Y	K	I	V	L	A	G	D	A	A	V	G	K	S	S	F	L	M	R	L	C	K	N	E	.	.	.	.	.	.	.	F	R	G	V	D	F	Q	M	K	T	L	I	V	.	D	G	E	R	T	V	L	Q	L	W	D	T	A	G	Q	E	R	F	R	S	I	A	K	S	Y	.	.	.	.	.	.	F	R	K	A
Template Known Secondary structure								S	S	T	T	S	S											S		.	.	.	.	.	.	.														.	T	T											T	T		T	T									.	.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.														.																										.	.	.	.	.	.
Template SS confidence
		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.								.	.	.	.	570	.	.	.	.	.	.	.	.		.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.							.	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.											.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	L	L	H	V	I	D	A	A	D	V	R	V	Q	E	N	I	E	A	V	N	T	V	L	E	E	I	D	A	H	E	I	P	T	L	L	V	M	N	K	I	D	M	.	.	.	.	.	.	.	.	.	.	L	E	D	F	E	P	R	I	D	R	D	E	E	N	K	P	N	R	V	W	L	S	A	Q	T	G
Query Conservation																																														.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.															.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.
Template Sequence		D	G	V	L	L	L	Y	D	V	T	C	E	K	S	F	L	N	I	R	E	W	V	D	M	I	E	D	.	.	.	A	A	V	P	I	M	L	V	G	N	K	A	D	I	R	D	T	A	A	T	E	G	Q	K	C	V	P	G	H	F	G	E	K	L	A	M	T	Y	G	A	L	F	C	E	T	S	A	K	D	G
Template Known Secondary structure		S								T	T							T											.	.	.												G	G	G							T	T																	T								T	T	T
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.				.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	I	P	Q	L	F	Q	A	L	T	E	R	L	S	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	N	I	V	E	A	V	L	H	L	A	R	E	V	K	K	R
Template Known Secondary structure		T	T														T
Template Predicted Secondary structure
Template SS confidence
		695	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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