Job Description P25519 Confidence 98.81% Date Thu Jan 5 11:41:54 GMT 2012 Rank 268 Aligned Residues 228 % Identity 22% Template c2og2A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:putative signal recognition particle receptor; PDBTitle: crystal structure of chloroplast ftsy from arabidopsis2 thaliana Resolution 2.00 Å

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		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.										.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.									.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Query Sequence		T	H	E	G	K	L	Q	V	E	L	A	Q	L	R	H	L	A	T	R	L	V	R	G	W	T	H	L	E	R	Q	K	G	G	I	G	L	.	.	.	.	.	.	.	.	.	R	G	P	G	E	T	Q	L	E	T	D	R	R	L	L	R	N	R	I	.	.	.	.	.	.	.	.	V	Q	I	Q	S	R	L	E
Query Conservation																																						.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	D	V	E	K	V	F	S	G	F	S	K	T	R	E	N	L	A	V	I	D	E	L	L	L	F	W	N	L	A	E	T	D	R	V	L	D	E	L	E	E	A	L	L	V	S	D	F	G	P	K	I	T	V	R	I	V	E	R	L	R	E	D	I	M	S	G	K	L	K	S	G	S	E	I	K	D	A	L	K
Template Known Secondary structure											T								T							T	T			G	G	G															T	T																			T	T	S			S
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.							.	220	.	.		.	.	.	.	.	.	.	230													.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.																					.	.	.	.	.	.					.									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.																					.	.	.	.	.	.					.									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	E	K	Q	R	E	Q	G	R	Q	S	R	I	K	A	D	V	P	.	.	T	V	S	L	V	G	Y	T	N	A	G	K	S	T	L	F	N	R	I	T	.	.	.	.	.	.	E	A	R	V	.	Y	A	A	D	Q	L	F	A	.	.	.	.	.	.	.	.	.	.	.	.	T	L	D	P	T	L	R	R
Query Conservation																					.	.																					.	.	.	.	.	.					.									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.																					.	.	.	.	.	.					.									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	S	V	L	E	M	L	A	K	K	T	E	L	Q	L	G	F	R	K	P	A	V	I	M	I	V	G	V	N	G	G	G	K	T	T	S	L	G	K	L	A	H	R	L	K	N	E	G	T	K	V	L	M	A	A	G	D	T	F	R	A	A	A	S	D	Q	L	E	I	W	A	E	R	T	G	C	E	I	V	V
Template Known Secondary structure													S					S	S	S	S									T	T	S																T	T											S																T
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		239	240	.	.																		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.						.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.
Query Sequence		I	D	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	G	E	T	V	L	A	D	T	V	G	F	I	R	H	L	P	H	D	L	V	A	A	F	K	A	T	L	Q	E	T	.	.	.	.	.	R	Q	A	T	L	L	L	H	V	I	D	A	A	D	V	R	V	Q	E	N	I	E
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																				.	.	.	.	.															.	.
Template Conservation																																			.																																							.	.
Template Sequence		A	E	G	D	K	A	K	A	A	T	V	L	S	K	A	V	K	R	G	K	E	E	G	Y	D	V	V	L	C	D	T	S	G	.	R	L	H	T	N	Y	S	L	M	E	E	L	I	A	C	K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D	G	N	T	.	.	G	L	N	M	L	P
Template Known Secondary structure			S	S	S	S																	T	T		S									.		S	S																				S	T	T			S								G	G	G	.	.	G	G	G	G
Template Predicted Secondary structure																																			.																																							.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	N	T	V	L	E	E	I	D	A	H	E	I	P	T	L	L	V	M	N	K	I	D	M	L	E	D	F	E	P	R	I	D	R	D	E	E	N	K	P	N	R	V	W	L	S	A	Q	T	G	A	G	I	P	Q	L
Query Conservation
Alig confidence														.	.	.	.																																.	.
Template Conservation														.	.	.	.																																.	.
Template Sequence		Q	A	R	E	F	N	E	V	V	G	I	T	.	.	.	.	G	L	I	L	T	K	L	D	G	S	A	R	G	G	C	V	V	S	V	V	E	E	L	G	I	P	V	K	F	I	G	.	.	V	G	E	A	V	E	D	L
Template Known Secondary structure										T				.	.	.	.						S		T	T		S		T																			.	.		S	S	S	G	G	G
Template Predicted Secondary structure														.	.	.	.																																.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.					.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.			.	.	.	310	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions