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Job DescriptionP25519
Confidence98.04%DateThu Jan 5 11:41:54 GMT 2012
Rank293Aligned Residues122
% Identity16%Templatec2g83B_
PDB info PDB header:signaling proteinChain: B: PDB Molecule:guanine nucleotide-binding protein g(i), alpha-1 PDBTitle: structure of activated g-alpha-i1 bound to a nucleotide-2 state-selective peptide: minimal determinants for3 recognizing the active form of a g protein alpha subunit
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   231........240.........250.........260.........270.........280........ .290.........
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Query Sequence  TLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAAD. . . . . . . . . . . VRVQENIEAVN
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Template Sequence  TTGIVETHFTF. KDLHFKMFDVGGQRSERKKWIHC. . . . . . . . FEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFD
Template Known Secondary structure 

S
.TT


SGGGGGGGGGG........
SS

GGGTT
B
SSSTTSB
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   181........190. ........200.........210.... .....220.........230.........240.........250.
 
   300.........310.........320. ........330........ .340.........
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Query Sequence  TVLEEIDAHEIPTLLVMNKIDM. . . . . . . . . . . . . . . . . . . LEDFEPRIDRDEENKPN. . . . . . . . . . . RVWLSAQTGAG
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Template Sequence  SICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTCATDTKN
Template Known Secondary structure  S
STTSSS
TTTS
GGGT
TT

S

STTS
S
TTT


TTSTT
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   252.......260.........270.........280.........290.........300.........310.........320.........330.
 
   350.........360.
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Query Sequence  IPQLFQALTERL
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Template Sequence  VQFVFDAVTDVI
Template Known Secondary structure  T
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   332.......340...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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