Job Description P25519 Confidence 99.63% Date Thu Jan 5 11:41:54 GMT 2012 Rank 125 Aligned Residues 160 % Identity 18% Template c2g3yA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:gtp-binding protein gem; PDBTitle: crystal structure of the human small gtpase gem Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	T	V	S	L	V	G	Y	T	N	A	G	K	S	T	L	F	N	R	I	T	E	A	R	V	Y	A	A	D	Q	L	F	A	T	L	D	P	T	L	R	R	I	D	V	A	D	V	G	E	T	V	L	A	D	T	V	G	F	I	R	H	L	P	H	D	L	V	A	A	F	K	A	T	L	Q	E	T	R	Q
Query Conservation
Alig confidence																																																												.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.
Template Sequence		Y	Y	R	V	V	L	I	G	E	Q	G	V	G	K	S	T	L	A	N	I	F	A	G	V	H	D	S	M	D	S	D	L	G	E	D	T	Y	E	R	T	L	M	V	D	G	E	S	A	T	I	I	L	L	D	M	W	E	N	.	.	.	.	.	.	.	.	K	G	E	N	E	W	L	H	D	H	C	M	Q	V
Template Known Secondary structure											T	T	S	S														T	T						T	T									T	T											T	T	T	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.									.	.	.	.	.	.	.	140	.	.	.	.	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.					.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure																									.																												.	.	.	.
Query SS confidence																									.																												.	.	.	.
Query Sequence		A	T	L	L	L	H	V	I	D	A	A	D	V	R	V	Q	E	N	I	E	A	V	N	.	T	V	L	E	E	I	D	A	H	E	I	P	T	L	L	V	M	N	K	I	D	M	L	E	D	F	E	.	.	.	.	P	R	I	D	R	D	E	E	N	K	P	N	R	V	W	L	S	A	Q	T	G	A	G	I	P
Query Conservation																									.																												.	.	.	.
Alig confidence																									.																												.	.	.	.
Template Conservation
Template Sequence		G	D	A	Y	L	I	V	Y	S	I	T	D	R	A	S	F	E	K	A	S	E	L	R	I	Q	L	R	R	A	R	Q	T	E	D	I	P	I	I	L	V	G	N	K	S	D	L	V	R	C	R	E	V	S	V	S	E	G	R	A	C	A	V	V	F	D	C	K	F	I	E	T	S	A	A	V	Q	H	N	V	K
Template Known Secondary structure			S								T	T																	T	S	G	G	G	T	T	S									T	T		G	G	G			S													T							B	T	T	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	F	Q	A	L	T	E	R	L	S	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	F	E	G	I	V	R	Q	V	R	L	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions