Job Description P25519 Confidence 100.00% Date Thu Jan 5 11:41:54 GMT 2012 Rank 2 Aligned Residues 300 % Identity 18% Template c2e87A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ph1320; PDBTitle: crystal structure of hypothetical gtp-binding protein ph1320 from2 pyrococcus horikoshii ot3, in complex with gdp Resolution 2.35 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																																															.	.
Query SS confidence																																															.	.
Query Sequence		P	K	Y	F	V	G	E	G	K	A	V	E	I	A	E	A	V	K	A	T	G	A	S	V	V	L	F	D	H	A	L	S	P	A	Q	E	R	N	L	E	R	L	C	E	C	.	.	R	V	I	D	R	T	G	L	I	L	D	I	F	A	Q	R	A	R	T	H	E	G	K	L	Q	V	E	L	A	Q	L	R	H
Query Conservation																																															.	.
Alig confidence																						.	.	.	.																						.	.
Template Conservation																						.	.	.	.
Template Sequence		S	S	F	K	P	R	G	N	K	V	K	K	A	R	L	R	E	E	L	R	.	.	.	.	V	R	T	V	S	N	V	V	R	D	N	L	R	K	V	L	E	R	T	P	G	L	S	T	L	P	K	F	Y	Q	E	L	V	D	V	L	V	D	R	D	T	F	H	K	A	X	A	G	I	D	W	A	I	R	I	I
Template Known Secondary structure			T					S	S													.	.	.	.																			S			G	G	G	S
Template Predicted Secondary structure																						.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		L	A	T	R	L	V	R	G	W	T	H	L	E	R	Q	K	G	G	I	G	L	R	G	P	G	E	T	Q	L	E	T	D	R	R	L	L	R	N	R	I	V	Q	I	Q	S	R	L	E	R	V	E	K	Q	R	E	Q	G	R	Q	S	R	I	K	A	.	D	V	P	T	V	S	L	V	G	Y	T	N	A	G	K
Query Conservation																																																																		.
Alig confidence			.	.	.	.	.																																																											.
Template Conservation			.	.	.	.	.
Template Sequence		R	.	.	.	.	.	E	L	E	E	R	Y	V	E	R	I	R	Y	S	N	D	P	N	E	I	A	E	L	R	R	Q	F	Y	G	R	V	A	S	V	L	R	D	I	D	D	R	L	R	Y	L	N	K	A	R	E	V	L	K	D	L	P	V	V	D	L	E	I	P	T	V	V	I	A	G	H	P	N	V	G	K
Template Known Secondary structure			.	.	.	.	.												T																									T														G	G	G	S					S	S	S								S	T	T	S	S
Template Predicted Secondary structure			.	.	.	.	.
Template SS confidence
		106						.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		S	T	L	F	N	R	I	T	E	A	R	V	Y	A	A	D	Q	L	F	A	T	L	D	P	T	L	R	R	I	D	V	A	D	V	G	E	T	V	L	A	D	T	V	G	F	I	R	.	H	L	P	H	D	L	V	A	A	F	K	A	T	L	Q	E	T	R	Q	A	T	L	L	L	H	V	I	D	A	A	D	V
Query Conservation																																																	.
Alig confidence																																	.																.
Template Conservation																																	.
Template Sequence		S	T	L	L	K	A	L	T	T	A	K	P	E	I	A	S	Y	P	F	T	T	R	G	I	N	V	G	Q	F	E	D	.	G	Y	F	R	Y	Q	I	I	D	T	P	G	L	L	D	R	P	I	S	E	R	N	E	I	E	K	Q	A	I	L	A	L	R	Y	L	G	N	L	I	I	Y	I	F	D	P	S	E	H
Template Known Secondary structure										S	S								T	T		S	S										.	T	T									T	T	T	S	S	S		S	T	T	S										G	G	G	G	T		S								T	T		T
Template Predicted Secondary structure																																	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.			.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure																.																							.	.
Query SS confidence																.																							.	.
Query Sequence		R	V	Q	E	N	I	E	A	V	N	T	V	L	E	.	E	I	D	A	H	E	I	P	T	L	L	V	M	N	K	I	D	M	L	E	D	F	.	.	E	P	R	I	D	R	D	E	E	N	K	P	N	R	V	W	L	S	A	Q	T	G	A	G	I	P	Q	L	F	Q	A	L	T	E	R	L	S	G
Query Conservation																.																							.	.
Alig confidence																.																							.	.
Template Conservation
Template Sequence		C	G	F	P	L	E	E	Q	I	H	L	F	E	E	V	H	G	E	F	K	D	L	P	F	L	V	V	I	N	K	I	D	V	A	D	E	E	N	I	K	R	L	E	K	F	V	K	E	K	G	L	N	P	I	K	I	S	A	L	K	G	T	G	I	D	L	V	K	E	E	I	I	K	T	L	R	P
Template Known Secondary structure		T	S	S																T	T	T	S									T	T	T																T	T							B	T	T	T	T	B	T
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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