Job Description P25519 Confidence 99.86% Date Thu Jan 5 11:41:54 GMT 2012 Rank 32 Aligned Residues 152 % Identity 24% Template c2dwqB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:gtp-binding protein; PDBTitle: thermus thermophilus ychf gtp-binding protein Resolution 2.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.												.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	V	S	L	V	G	Y	T	N	A	G	K	S	T	L	F	N	R	I	T	E	A	R	V	Y	A	A	D	Q	L	F	A	T	L	D	P	.	.	.	.	.	.	.	.	.	.	.	T	L	R	R	I	D	V	A	D	V	G	E	T	V	L	A	D	T	V	G	F	I	R	H	L	P	H	D	L	V	A	A	F
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	G	I	V	G	L	P	N	V	G	K	S	T	L	F	N	A	L	T	R	A	N	A	L	A	K	N	V	G	V	V	P	L	E	D	E	R	L	Y	A	L	Q	R	T	F	A	K	G	E	R	V	P	P	V	V	P	T	H	V	E	F	V	D	I	A	G	L	V	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S	S	S	S													T																						T		B	T	T	B														T	T	T	T		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	A	T	L	Q	E	T	R	Q	A	T	L	L	L	H	V	I	D	A	A	D	V	R	V	Q	E	N	I	E	A	V	N	T	V	L	E	E	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	Q	F	L	A	H	I	R	E	V	A	A	I	A	H	V	L	R	C	F	P	D	P	L	E	D	A	E	V	V	E	T	E	L	L	L	A	D	L	A	T	L	E	R	R	L	E	R	L	R	K	E	A	R	A	D	R	E	R	L	P	L	L	E	A	A	E	G	L	Y	V	H	L	Q	E	G	K	P	A	R
Template Known Secondary structure											S	S																																													S	G	G	G																T	T			G	G
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
																			307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.								.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	E	I	P	T	L	L	V	M	N	K	I	D	M	L	E	D	F	E	.	.	.	.	.	.	.	P	R	I	D	R	D	E	E	N	K	P	N	R	V	W	L	S	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	F	P	P	S	E	A	V	A	R	F	L	K	E	T	P	L	L	T	A	K	P	V	I	Y	V	A	N	V	A	E	E	D	L	P	D	G	R	G	N	P	Q	V	E	A	V	R	R	K	A	L	E	E	G	A	E	V	V	V	V	S	A	R	L	E	A	E	L	A	E	L	S	G	E	E	A	R	E	L	L
Template Known Secondary structure		G	S				S	S	T	T						S			G	G	G	S										T	T	T	T	T	T	T	T	T															T		B												T	T	T	S	T
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
							346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	T	G	A	G	I	P	Q	L	F	Q	A	L	T	E	R	L
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		A	A	Y	G	L	Q	E	S	G	L	Q	R	L	A	R	A	G	Y	R	A	L
Template Known Secondary structure				T	T		S	S														T
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions