Job Description P25519 Confidence 98.75% Date Thu Jan 5 11:41:54 GMT 2012 Rank 269 Aligned Residues 181 % Identity 23% Template c2cnwF_ PDB info PDB header:signal recognition Chain: F: PDB Molecule:cell division protein ftsy; PDBTitle: gdpalf4 complex of the srp gtpases ffh and ftsy Resolution 2.39 Å

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		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.						.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.							.	220	.	.		.	.	.	.	.	.	.	230
Predicted Secondary structure																	.	.	.	.	.																																									.	.	.	.	.	.					.									.
Query SS confidence																	.	.	.	.	.																																									.	.	.	.	.	.					.									.
Query Sequence		R	R	L	L	R	N	R	I	V	Q	I	Q	S	R	L	.	.	.	.	.	E	R	V	E	K	Q	R	E	Q	G	R	Q	S	R	I	K	A	D	V	P	T	V	S	L	V	G	Y	T	N	A	G	K	S	T	L	F	N	R	I	T	.	.	.	.	.	.	E	A	R	V	.	Y	A	A	D	Q	L	F	A	.
Query Conservation																	.	.	.	.	.																																									.	.	.	.	.	.					.									.
Alig confidence																	.	.	.	.	.																																									.	.	.	.	.	.					.									.
Template Conservation
Template Sequence		L	S	A	T	E	E	I	L	Q	E	V	R	A	S	G	R	K	D	L	K	E	A	V	K	E	K	L	V	G	M	L	E	P	P	V	E	P	K	G	R	V	V	L	V	V	G	V	N	G	V	G	K	T	T	T	I	A	K	L	G	R	Y	Y	Q	N	L	G	K	K	V	M	F	C	A	G	D	T	F	R	A
Template Known Secondary structure																		S		S												T							S	S	S							S	T	T	S	S														T	T	T											S	S	T
Template Predicted Secondary structure
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
													231	.	.	.	.	.	.	.	.	240	.	.																	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.						.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	T	L	D	P	T	L	R	R	I	D	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	G	E	T	V	L	A	D	T	V	G	F	I	R	H	L	P	H	D	L	V	A	A	F	K	A	T	L	Q	E	T	R	.	.	.	.	.	Q	A	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																					.	.	.	.	.
Template Conservation																																																					.
Template Sequence		A	G	G	T	Q	L	S	E	W	G	K	R	L	S	I	P	V	I	Q	G	P	E	G	T	D	P	A	A	L	A	Y	D	A	V	Q	A	M	K	A	R	G	Y	D	L	L	F	V	D	T	A	G	.	R	L	H	T	K	H	N	L	M	E	E	L	K	K	V	K	R	A	I	A	K	A	D	P	E	E	P	K
Template Known Secondary structure		T													T								T	T	S																T	T		S									.			T	T																				T	T
Template Predicted Secondary structure																																																					.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	L	H	V	I	D	A	A	D	V	R	V	Q	E	N	I	E	A	V	N	T	V	L	E	E	I	D	A	H	E	I	P	T	L	L	V	M	N	K	I	D	M	L	E	D	F	E	P	R	I	D	R	D	E	E	N	K	P	N	R	V	W	L	S	A	Q	T	G	A	G	I	P	Q	L
Query Conservation
Alig confidence												.	.																			.	.	.	.																																.	.
Template Conservation												.	.																			.	.	.	.																																.	.
Template Sequence		E	V	W	L	V	L	D	A	V	T	.	.	G	Q	N	G	L	E	Q	A	K	K	F	H	E	A	V	G	L	T	.	.	.	.	G	V	I	V	T	K	L	D	G	T	A	K	G	G	V	L	I	P	I	V	R	T	L	K	V	P	I	K	F	V	G	.	.	V	G	E	G	P	D	D	L
Template Known Secondary structure									T	T		.	.		T																S	.	.	.	.							T	T	S	S				T	T																	.	.		S	S	S	T	T
Template Predicted Secondary structure												.	.																			.	.	.	.																																.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.			.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250					.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.			.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions