Job Description P25519 Confidence 100.00% Date Thu Jan 5 11:41:54 GMT 2012 Rank 3 Aligned Residues 235 % Identity 23% Template c1xzqA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable trna modification gtpase trme; PDBTitle: structure of the gtp-binding protein trme from thermotoga2 maritima complexed with 5-formyl-thf Resolution 2.90 Å

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		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.						.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.
Query SS confidence																															.	.	.	.	.
Query Sequence		R	A	R	T	H	E	G	K	L	Q	V	E	L	A	Q	L	R	H	L	A	T	R	L	V	R	G	W	T	H	.	.	.	.	.	L	E	R	Q	K	G	G	I	G	L	R	G	P	G	E	T	Q	L	E	T	D	R	R	L	L	R	N	R	I	V	Q	I	Q	S	R	L	E	R	V	E	K	Q	R	E	Q	G
Query Conservation																															.	.	.	.	.
Alig confidence										.																					.	.	.	.	.													.	.	.	.
Template Conservation										.																																						.	.	.	.
Template Sequence		E	A	K	S	E	T	S	L	.	K	L	S	L	R	N	L	K	G	G	L	R	D	F	V	D	S	L	R	R	E	L	I	E	V	L	A	E	I	R	V	E	L	D	Y	P	D	.	.	.	.	E	I	E	T	N	T	G	E	V	V	T	R	L	E	R	I	K	E	K	L	T	E	E	L	K	K	A	D	A	G
Template Known Secondary structure		T			S					.							T	T	T																											S	S	.	.	.	.	S																									S
Template Predicted Secondary structure										.																																						.	.	.	.
Template SS confidence
		131	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.
Predicted Secondary structure																																				.																																												.
Query SS confidence																																				.																																												.
Query Sequence		R	Q	S	R	I	K	A	D	V	P	T	V	S	L	V	G	Y	T	N	A	G	K	S	T	L	F	N	R	I	T	E	A	R	V	.	Y	A	A	D	Q	L	F	A	T	L	D	P	T	L	R	R	I	D	V	A	D	V	G	E	T	V	L	A	D	T	V	G	F	I	R	H	L	P	H	D	L	V	A	.	A
Query Conservation																																				.																																												.
Alig confidence								.	.	.																										.																				.																								.
Template Conservation								.	.	.																																														.
Template Sequence		I	L	L	N	R	G	.	.	.	L	R	M	V	I	V	G	K	P	N	V	G	K	S	T	L	L	N	R	L	L	N	E	D	R	A	I	V	T	D	I	P	G	T	T	R	D	V	I	S	E	E	I	V	I	.	R	G	I	L	F	R	I	V	D	T	A	G	V	R	S	E	T	N	D	L	V	E	R	L	G
Template Known Secondary structure								.	.	.									T	T	G	G	G	S										T	B										S			S								.	T	T								S	S				S	S			S	S
Template Predicted Secondary structure								.	.	.																																														.
Template SS confidence
		206	.	.	.	210	.				.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		F	K	A	T	L	Q	E	T	R	Q	A	T	L	L	L	H	V	I	D	A	A	D	V	R	V	Q	E	N	I	E	A	V	N	T	V	L	E	E	I	D	A	H	E	I	P	T	L	L	V	M	N	K	I	D	M	L	E	D	F	E	P	R	I	D	R	D	E	E	N	K	P	.	N	R	V	W	L	S	A	Q
Query Conservation																																																																									.
Alig confidence																																					.	.	.	.	.	.																															.
Template Conservation																																					.	.	.	.	.	.
Template Sequence		I	E	R	T	L	Q	E	I	E	K	A	D	I	V	L	F	V	L	D	A	S	S	P	L	D	E	E	D	R	K	I	L	E	R	I	.	.	.	.	.	.	K	N	K	R	Y	L	V	V	I	N	K	V	D	V	V	E	K	I	N	E	E	E	I	K	N	K	L	G	T	D	R	H	M	V	K	I	S	A	L
Template Known Secondary structure													S								S	S	S													G	.	.	.	.	.	.	G	G	S	S									S	S				S									T	S		S	T	T						T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.							.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	A	G	I	P	Q	L	F	Q	A	L	T	E	R	L	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	G	E	G	L	E	K	L	E	E	S	I	Y	R	E	T	Q	E
Template Known Secondary structure		T	T														T
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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