Job Description P25519 Confidence 97.91% Date Thu Jan 5 11:41:54 GMT 2012 Rank 298 Aligned Residues 121 % Identity 17% Template c1tndA_ PDB info PDB header:binding protein(gtp) Chain: A: PDB Molecule:transducin; PDBTitle: the 2.2 angstroms crystal structure of transducin-alpha complexed with2 gtp gamma s Resolution 2.20 Å

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		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.												.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	D	P	T	L	R	R	I	D	V	A	D	V	G	E	T	V	L	A	D	T	V	G	F	I	R	H	L	P	H	D	L	V	A	A	F	K	A	T	L	Q	E	T	R	Q	.	A	T	L	L	L	H	V	I	D	A	A	D	.	.	.	.	.	.	.	.	.	.	.	V	R	V	Q	E	N	I	E	A	V
Query Conservation																																																.													.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.													.	.	.	.	.	.	.	.	.														.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.													.	.	.	.	.	.	.	.	.
Template Sequence		T	T	G	I	I	E	T	Q	F	S	F	.	K	D	L	N	F	R	M	F	D	V	G	G	.	.	.	.	.	.	.	.	.	Q	R	S	E	R	K	K	W	I	H	C	F	E	G	V	T	C	I	I	F	I	A	A	L	S	A	Y	D	M	V	L	V	E	D	D	E	V	N	R	M	H	E	S	L	H	L	F
Template Known Secondary structure				S									.	T	T											.	.	.	.	.	.	.	.	.	S					G	G	G	G	G	G		T	T		S								G	G	G	G	G		B		S	S		T	T	S	B
Template Predicted Secondary structure													.													.	.	.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.										200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.																				.	.	.	.	.	.	.	.	330	.	.	.	.												.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	T	V	L	E	E	I	D	A	H	E	I	P	T	L	L	V	M	N	K	I	D	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	D	F	E	P	R	I	D	R	D	E	E	.	.	.	.	.	.	.	.	.	.	.	N	K	P	N	R	V	W	L	S	A	Q	T	G	A
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	S	I	C	N	H	R	Y	F	A	T	T	S	I	V	L	F	L	N	K	K	D	V	F	S	E	K	I	K	K	A	H	L	S	I	C	F	P	D	Y	N	G	P	N	T	Y	E	D	A	G	N	Y	I	K	V	Q	F	L	E	L	N	M	R	R	D	V	K	E	I	Y	S	H	M	T	C	A	T	D	T	Q
Template Known Secondary structure						T		S	G	G	G	S																		T	T	S		G	G	G	T		T	T			S																	T	T		T	T	B	T	T	B									T	T
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		349	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	P	Q	L	F	Q	A	L	T	E	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	V	K	F	V	F	D	A	V	T	D	I	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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