Job Description P25519 Confidence 99.87% Date Thu Jan 5 11:41:54 GMT 2012 Rank 29 Aligned Residues 161 % Identity 22% Template c1ni3A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:ychf gtp-binding protein; PDBTitle: structure of the schizosaccharomyces pombe ychf gtpase Resolution 2.80 Å

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		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.																	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																																		.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	R	I	K	A	D	V	P	T	V	S	L	V	G	Y	T	N	A	G	K	S	T	L	F	N	R	I	T	E	A	R	V	.	Y	A	A	D	Q	L	F	A	T	L	D	P	T	L	R	R	I	D	V	A	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	T	V	L	A	D	T	V
Query Conservation																																		.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																									.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.
Template Sequence		G	R	P	G	N	N	L	.	K	T	G	I	V	G	X	P	N	V	G	K	S	T	F	F	R	A	I	T	K	S	V	L	G	N	P	A	N	Y	P	Y	A	T	I	D	P	E	E	A	K	V	A	V	P	D	E	R	F	D	W	L	C	E	A	Y	K	P	K	S	R	V	P	A	F	L	T	V	F	D	I	A
Template Known Secondary structure		S	S	S	S	S			.								S	S	S	S											S	T	T	T	S	T	T			S	S					T	T																					S												T	G
Template Predicted Secondary structure									.
Template SS confidence
		15	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.											.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.
Query Sequence		G	F	I	R	H	L	P	H	D	L	V	A	A	F	K	A	T	L	Q	E	T	R	Q	A	T	L	L	L	H	V	I	D	A	A	D	.	.	.	.	.	.	.	.	.	.	V	R	V	Q	E	N	I	E	A	V	N	T	V	L	E	E	I	D	A	H	E	I	P	T	L	L	V	M	N	K	I	D	M	L	E
Query Conservation																																					.	.	.	.	.	.	.	.	.	.
Alig confidence															.																						.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	T	K	G	A	S	T	G	V	G	L	G	.	N	A	F	L	S	H	V	R	A	V	D	A	I	Y	Q	V	V	R	A	F	D	D	A	E	I	I	H	V	E	G	D	V	D	P	I	R	D	L	S	I	I	V	D	E	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	K	D	A	E	F
Template Known Secondary structure		G	G						S	S	S	S	S		.								T	T		S											T	T		S	S			S	S	S	S															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.															.	.	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	E	P	R	I	D	R	D	E	E	N	K	P	N	R	V	W	L	S	A	Q	T	G	A	G	I	P	Q	L	F	Q	A	L	T	E	R	L	S	G	E	V	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	K	H	L	E	G	L	R	K	I	T	S	R	G	A	N	T	L	E	X	K	A	K	K	E	E	Q	A	I	I	E	K	V	Y	Q	Y	L	T	E	T	K	Q	P
Template Known Secondary structure												T	T			S	S		S	S	S																				T	T		S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions