Job Description P25519 Confidence 99.56% Date Thu Jan 5 11:41:54 GMT 2012 Rank 168 Aligned Residues 149 % Identity 21% Template c1m2oD_ PDB info PDB header:protein transport/signaling protein Chain: D: PDB Molecule:gtp-binding protein sar1; PDBTitle: crystal structure of the sec23-sar1 complex Resolution 2.50 Å

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		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	S	L	V	G	Y	T	N	A	G	K	S	T	L	F	N	R	I	T	E	A	R	V	Y	A	A	D	Q	L	F	A	T	L	D	P	T	L	R	R	I	D	V	A	D	V	G	E	T	V	L	A	D	T	V	G	F	I	R	H	L	P	H	D	L	V	A	A	F	K	A	T	L	Q	E	T	R	Q	A	T
Query Conservation
Alig confidence																										.	.	.																	.																								.	.	.	.	.	.	.	.
Template Conservation																										.	.	.																	.																								.	.	.	.	.	.	.	.
Template Sequence		K	L	L	F	L	G	L	D	N	A	G	K	T	T	L	L	H	M	L	K	N	D	R	L	.	.	.	A	T	L	Q	P	T	W	H	P	T	S	E	E	L	A	I	.	G	N	I	K	F	T	T	F	D	L	G	G	H	I	Q	A	R	R	L	W	K	D	Y	.	.	.	.	.	.	.	.	F	P	E	V	N
Template Known Secondary structure								S	T	T	S	S										T	S			.	.	.								S									.	S	S	S										S	S	G	G	G	G	T					.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure																										.	.	.																	.																								.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.									.	.	90	.	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.								.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																							.																																							.	.	.	.	.	.	.
Query SS confidence																							.																																							.	.	.	.	.	.	.
Query Sequence		L	L	L	H	V	I	D	A	A	D	V	R	V	Q	E	N	I	E	A	V	N	.	T	V	L	E	E	I	D	A	H	E	I	P	T	L	L	V	M	N	K	I	D	M	L	E	D	F	E	P	R	I	D	R	D	E	E	N	K	P	.	.	.	.	.	.	.	N	R	V	W	L	S	A	Q	T	G	A	G	I
Query Conservation																							.																																							.	.	.	.	.	.	.
Alig confidence																							.																																							.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	I	V	F	L	V	D	A	A	D	P	E	R	F	D	E	A	R	V	E	L	D	A	L	F	N	I	A	E	L	K	D	V	P	F	V	I	L	G	N	K	I	D	A	P	N	A	V	S	E	A	E	L	R	S	A	L	G	L	L	N	T	T	G	R	P	V	E	V	F	M	C	S	V	V	M	R	N	G	Y
Template Known Secondary structure									T	T		G	G	G													T		G	G	G	T	T			B			B				T	T	S	T	T											T	T		S	S						B			B			B	T	T	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		351	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	L	F	Q	A	L	T	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	A	F	Q	W	L	S	Q
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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