Return to main results Retrieve Phyre Job Id

Job DescriptionP25519
Confidence99.97%DateThu Jan 5 11:41:54 GMT 2012
Rank6Aligned Residues170
% Identity27%Templatec1lnzA_
PDB info PDB header:cell cycleChain: A: PDB Molecule:spo0b-associated gtp-binding protein; PDBTitle: structure of the obg gtp-binding protein
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   197..200.........210.........220.........230.........240.........250.........260.........270......
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  VPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQ
Query Conservation     




 









 


  
 
 
  
 


   
 
    
  
 







  

  
      


    
Alig confidence 





























































.
















Template Conservation 







 












 

 


  




 
 

 
   
     
 
 


   .
     
    
  
 
Template Sequence  LADVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGXVETDDGRSFVXADLPGLIEG. AHQGVGLGHQFLRHIER
Template Known Secondary structure 


SSTTSSS

SSTTSS





SSS
.TT
TTTT
Template Predicted Secondary structure 


























.


Template SS confidence 















































































   158.160.........170.........180.........190.........200.........210......... 220.........230......
 
   277..280.........290.........300..... ....310.........320...... ...330.........340.........
Predicted Secondary structure 








.....












..










Query SS confidence 




























. . . . .




















. .






















Query Sequence  ATLLLHVIDAADVRVQENIEAVNTVLEEI. . . . . DAHEIPTLLVMNKIDMLEDFE. . PRIDRDEENKPNRVWLSAQTGAG
Query Conservation 




 




             

  
.....     
 


 

 

     ..             
 


 

 
Alig confidence 




























.....




















..






















Template Conservation     

 


               
  

      
  

 





 

      
  
   
     

 


 

 
Template Sequence  TRVIVHVIDXSGLEGRDPYDDYLTINQELSEYNLRLTERPQIIVANKXDXPEAAENLEAFKEKLTDDYPVFPISAVTREG
Template Known Secondary structure 

SS
SS


S
SSTTTS
B
B
TTSTT

S


B


SS

SST
Template Predicted Secondary structure 































Template SS confidence 















































































   237..240.........250.........260.........270.........280.........290.........300.........310......
 
   350.........360.......
Predicted Secondary structure 


Query SS confidence 

















Query Sequence  IPQLFQALTERLSGEVAQ
Query Conservation 

 
   
 
 
      
Alig confidence 

















Template Conservation 
 

   
   
      
Template Sequence  LRELLFEVANQLENTPEF
Template Known Secondary structure  TTS



Template Predicted Secondary structure 




Template SS confidence 

















   317..320.........330....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions