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Job DescriptionP25519
Confidence99.89%DateThu Jan 5 11:41:54 GMT 2012
Rank26Aligned Residues156
% Identity24%Templatec1jalA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:ychf protein; PDBTitle: ychf protein (hi0393)
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   199200.........210.........220.........230.........240... ......250.........260..
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Query Sequence  TVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVAD. . . . . . . . . . . . . . . . VGETVLADTVGFIRHLPHD
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Template Sequence  KCGIVGLPNVGKSTLFNALTKAG. . . . . . PFCTIEPNTGVVPMPDPRLDALAEIVKPERILPTTMEFVDIAGLVAGASKG
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TTSST
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   4.....10.........20...... ...30.........40.........50.........60.........70.......
 
   263......270.........280.........290....
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Query Sequence  LVAAFKATLQETRQATLLLHVIDAADVRVQEN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  EGLG. NKFLANIRETDAIGHVVRCFENIDPLDDIDTINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSVMEKILPV
Template Known Secondary structure  GGGT.

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   84... ..90.........100.........110.........120.........130.........140.........150.........160..
 
   295....300.........310.........320........ .330.........340.....
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Query Sequence  . . . . . . . . . . . . . IEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPR. . . . IDRDEENKPNRVWLSAQ. . . . . . . . . . . .
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Template Sequence  LENAGMIRSVGLDKEELQAIKSYNFLTLKPTMYIANVNEDGFENNPYLDRVREIAAKEGAVVVPVCAAIESEIAELDDEE
Template Known Secondary structure  TT

GGGS


GGG

STTS


TT
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TT

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   172.......180.........190.........200.........210.........220.........230.........240.........250.
 
   346...350.........360.
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Query Sequence  . . . . . . . . . . TGAGIPQLFQALTERL
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Template Sequence  KVEFLQDLGIEEPGLNRVIRAGYALL
Template Known Secondary structure  TTTSS

S
TTT
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   252.......260.........270.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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