Return to main results Retrieve Phyre Job Id

Job DescriptionP25519
Confidence99.61%DateThu Jan 5 11:41:54 GMT 2012
Rank139Aligned Residues156
% Identity15%Templatec1gwnA_
PDB info PDB header:gtpaseChain: A: PDB Molecule:rho-related gtp-binding protein rhoe; PDBTitle: the crystal structure of the core domain of rhoe/rnd3 - a2 constitutively activated small g protein
Resolution2.1 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   198.200.........210.........220.........230.........240.........250.........260.........270.......
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  PTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQA
Query Conservation    




 









 


  
 
 
  
 


   
 
    
  
 







  

  
      


    
Alig confidence 



































































........



Template Conservation   





   






       
      
                                    ........    
Template Sequence  CKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLS. . . . . . . . YPDS
Template Known Secondary structure  STTSSS


SS



SSSSS

SGGGTTTGGGG........
TT
Template Predicted Secondary structure 




































........



Template SS confidence 















































































   24.....30.........40.........50.........60.........70.........80.........90. ....
 
   278.280.........290.........300.........310.........320.........330...... ...340
Predicted Secondary structure 























.................

Query SS confidence 


























































. . . . . . . . . . . . . . . . .



Query Sequence  TLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENK. . . . . . . . . . . . . . . . . PNRV
Query Conservation 



 




             

  
     
 


 

 

               .................   
Alig confidence 


























































.................



Template Conservation     
   
                         




 

 

                          
         
Template Sequence  DAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYI
Template Known Secondary structure  STT
T
TT

GGGGG
TTT




T
S
Template Predicted Secondary structure 


































Template SS confidence 















































































   96...100.........110.........120.........130.........140.........150.........160.........170.....
 
   341....... .350.........360.
Predicted Secondary structure 




.
Query SS confidence 







.












Query Sequence  WLSAQTGA. GIPQLFQALTERL
Query Conservation   


 

 .


 
   
 
 
Alig confidence 







.












Template Conservation 
 


 
 


 
 
       
Template Sequence  ECSALQSENSVRDIFHVATLAC
Template Known Secondary structure 

TTT
Template Predicted Secondary structure 




Template SS confidence 





















   176...180.........190.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions