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Job DescriptionP25519
Confidence98.58%DateThu Jan 5 11:41:54 GMT 2012
Rank283Aligned Residues108
% Identity19%Templatec1f5nA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:interferon-induced guanylate-binding protein 1; PDBTitle: human guanylate binding protein-1 in complex with the gtp2 analogue, gmppnp.
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   194.....200.........210.........220. ........230.........240. ........250....... ..260...
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Query Sequence  KADVPTVSLVGYTNAGKSTLFNRITEAR. . VYAADQLFATLDPTLRRIDV. . . . . . . ADVGETVLADTVGFIR. HLPHDL
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Template Sequence  TQPMVVVAIVGLYRTGKSYLMNKLAGKKKGFSLGS. . . . TVQSHTKGIWMWCVPHPKKPGHILVLLDTEGLGDVEKGDNQ
Template Known Secondary structure 
SBBTTSSTT
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   35....40.........50.........60......... 70.........80.........90.........100.........110
 
   264.....270.........280.........290.........300.....
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Query Sequence  VAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEI
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Template Sequence  NDSWIFALAVLLSSTFVYNSIGTINQQAMDQLYYVTELTHRI
Template Known Secondary structure  T
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   111........120.........130.........140.........150..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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