Return to main results Retrieve Phyre Job Id

Job DescriptionP25519
Confidence99.94%DateThu Jan 5 11:41:54 GMT 2012
Rank12Aligned Residues160
% Identity18%Templatec1egaB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:protein (gtp-binding protein era); PDBTitle: crystal structure of a widely conserved gtpase era
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   200.........210.........220... ......230.........240.........250.........260.........270........
Predicted Secondary structure 








.
















Query SS confidence 























.






















































Query Sequence  VSLVGYTNAGKSTLFNRITEARVY. AADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQAT
Query Conservation 




 









 


  
 .
 
  
 


   
 
    
  
 







  

  
      


    

Alig confidence 























.

















.



































Template Conservation 




 









 
 
  
  

    


         .   

   



                        
Template Sequence  IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTE. GAYQAIYVDTPGLHMEEKRAINRLMNKAASSSIGDV
Template Known Secondary structure 
SSSSST
S




S

SS
.TTSSSS

T

TTS



Template Predicted Secondary structure 















.













Template SS confidence 















































































   11........20.........30.........40.........50... ......60.........70.........80.........
 
   279280.........290.........300.........310.........320.........330... ......340.........350...
Predicted Secondary structure 



















.....










Query SS confidence 






















































. . . . .



















Query Sequence  LLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDE. . . . . ENKPNRVWLSAQTGAGIPQL
Query Conservation 


 




             

  
     
 


 

 

            .....      
 


 

 


 
Alig confidence 















....


































.....



















Template Conservation                  ....            
 


 




                      

 


  
 

  
Template Sequence  ELVIFVVEGTRWTPDD. . . . EMVLNKLREGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTI
Template Known Secondary structure  TT


....SSSS
SGGG
S
TTTS

S
TTTTTT
Template Predicted Secondary structure 















....































Template SS confidence 















































































   90.........100..... ....110.........120.........130.........140.........150.........160.....
 
   354.....360....
Predicted Secondary structure 

Query SS confidence 










Query Sequence  FQALTERLSGE
Query Conservation     
 
 
   
Alig confidence 










Template Conservation     
   

  
Template Sequence  AAIVRKHLPEA
Template Known Secondary structure  T

B
Template Predicted Secondary structure 



Template SS confidence 










   166...170......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions