Job Description P0AFF6 Confidence 93.36% Date Thu Jan 5 11:26:07 GMT 2012 Rank 129 Aligned Residues 109 % Identity 20% Template d1mpga1 SCOP info DNA-glycosylase DNA-glycosylase DNA repair glycosylase, 2 C-terminal domains Resolution 1.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	T	L	E	E	L	A	Y	V	P	M	K	E	L	L	E	I	E	G	L	D	E	P	T	V	E	A	L	R	E	R	A	K	N	A	L	A	T	I	A	Q	A	Q	E	E	S	L	G	D	N	K	P	A	D	D	L	L	N	L	E	G	V	D	R	D	L	A	F	K	L	A	A	R	G	V	C	T	L	E
Query Conservation
Alig confidence																				.																				.
Template Conservation																				.																				.
Template Sequence		F	P	T	P	Q	R	L	A	A	A	D	P	Q	A	L	K	A	L	.	G	M	P	L	K	R	A	E	A	L	I	H	L	A	N	A	A	L	E	.	G	T	L	P	M	T	I	P	G	D	V	E	Q	A	M	K	T	L	Q	T	F	P	G	I	G	R	W	T	A	N	Y	F	A	L	R	G	W	Q	A	K	D
Template Known Secondary structure										T									T	.	T	S																		.	T		S		S	S			S										T	T	S	T	T														S			S	S
Template Predicted Secondary structure																				.																				.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	A	E	Q	G	I	D	D	L	A	D	I	E	G	L	T	D	E	K	A	G	A	L	I	M	A	A	R	N	I	C	W
Query Conservation
Alig confidence																															.	.
Template Conservation																															.	.
Template Sequence		V	F	L	P	D	D	Y	L	I	K	Q	R	F	P	G	M	T	P	A	Q	I	R	R	Y	A	E	R	W	K	.	.	P	W
Template Known Secondary structure					T	T								S	T	T											G	G	G	T	.	.	T
Template Predicted Secondary structure																															.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions