Job Description P0AFF6 Confidence 100.00% Date Thu Jan 5 11:26:07 GMT 2012 Rank 8 Aligned Residues 125 % Identity 34% Template d1hh2p4 SCOP info Transcription factor NusA, N-terminal domain Transcription factor NusA, N-terminal domain Transcription factor NusA, N-terminal domain Resolution 2.1

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	K	E	I	L	A	V	V	E	A	V	S	N	E	K	A	L	P	R	E	K	I	F	E	A	L	E	S	A	L	A	T	A	T	K	K	K	Y	E	Q	E	I	D	V	R	V	Q	I	D	R	K	S	G	D	F	D	T	F	R	R	W	L	V	V	D	E	V	T	Q	P	T	K	E	I	T	L	E	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	N	I	G	L	L	E	A	L	D	Q	L	E	E	E	K	G	I	S	K	E	E	V	I	P	I	L	E	K	A	L	V	S	A	Y	R	K	N	F	G	N	S	K	N	V	E	V	V	I	D	R	N	T	G	N	I	K	V	Y	Q	L	L	E	V	V	E	E	V	E	D	P	A	T	Q	I	S	L	E	E	A
Template Known Secondary structure					S	S		S	S	T	T	T	T	S	S	S	S																					T	T	T		S	S	S								S	T	T													S	S		S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	E	D	E	S	L	N	L	G	D	Y	V	E	D	Q	I	E	S	V	T	F	D	R	I	T	T	Q	T	A	K	Q	V	I	V	Q	K	V	R	E	A	E	R	A	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	I	D	P	L	A	E	V	G	S	I	V	K	K	E	L	N	V	K	N	F	G	R	I	A	A	Q	T	A	K	Q	V	L	I	Q	R	I	R	E	L	E	K	E	K
Template Known Secondary structure						T	T			T	T												S	S	S		S	G	G	G													T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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