Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFF6
Confidence54.67%DateThu Jan 5 11:26:07 GMT 2012
Rank244Aligned Residues27
% Identity26%Templated1egaa2
SCOP infoAlpha-lytic protease prodomain-like Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II)
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   304.....310.. .......320.........330
Predicted Secondary structure 
.





Query SS confidence 








.

















Query Sequence  TMDIAVEAG. NLAQAIGRNGQNVRLASQ
Query Conservation     
 
   .







 







 
Alig confidence 








.

















Template Conservation   
 
 
 
 


 




 
  

 
  
Template Sequence  NGLILVEREGQKKMVIGNKGAKIKTIGI
Template Known Secondary structure  SS
GGG
Template Predicted Secondary structure 







Template SS confidence 



























   232.......240.........250.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions