Job Description P0AFF6 Confidence 99.89% Date Thu Jan 5 11:26:07 GMT 2012 Rank 14 Aligned Residues 133 % Identity 26% Template d1dgsa1 SCOP info SAM domain-like RuvA domain 2-like NAD+-dependent DNA ligase, domain 3 Resolution 2.90

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		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		Q	A	K	H	Q	A	E	A	H	A	A	I	D	T	F	T	K	Y	L	D	I	D	E	D	F	A	T	V	L	V	E	E	G	F	.	S	T	L	E	E	L	A	Y	V	P	M	K	E	L	L	E	I	E	G	L	D	E	P	T	V	E	A	L	R	E	R	A	K	N	A	L	A	T	I	A	Q	A	Q	E	E
Query Conservation																																				.
Alig confidence																																				.																													.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.
Template Sequence		A	K	R	F	E	A	I	R	H	Y	A	S	R	K	A	M	D	I	E	G	L	G	E	K	L	I	E	R	L	L	E	K	G	L	V	R	D	V	A	D	L	Y	H	L	R	K	E	D	L	L	G	L	E	R	M	G	E	K	S	A	Q	N	L	.	.	.	.	.	.	.	L	R	Q	I	E	E	S	K	H	R
Template Known Secondary structure		G	G										S	T	T	S	S			T	T												T	T	S		S	S	G	G	G	G	G	G	G							T	T	S	S			S	T	T					.	.	.	.	.	.	.							G	G	G
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.
Template SS confidence
		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.								.	.	.	.	.	.	.	.	500	.
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	G	D	N	K	P	A	D	D	L	L	N	L	E	G	V	D	R	D	L	A	F	K	L	A	A	R	G	V	C	T	L	E	D	L	A	E	Q	G	I	D	D	L	A	D	I	E	G	L	T	D	E	K	A	G	A	L	I	M	A	A	R	N	I	C	W	F	G	D	E
Query Conservation
Alig confidence										.	.	.																		.																														.	.	.	.	.	.
Template Conservation										.	.	.																		.																														.	.	.	.	.	.
Template Sequence		G	L	E	R	L	L	Y	A	.	.	.	L	G	L	P	G	V	G	E	V	L	A	R	N	L	A	R	R	.	F	G	T	M	D	R	L	L	E	A	S	L	E	E	L	I	E	V	E	E	V	G	E	L	T	A	R	A	I	.	.	.	.	.	.	L	E	T	L	K	D	P
Template Known Secondary structure										.	.	.	T	T		S	S												T	.	T	S	B					T	T								T	S	T	T										.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.																		.																														.	.	.	.	.	.
Template SS confidence
		502	.	.	.	.	.	.	.				510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.		.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.							.	.	.	.	560	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions