Job Description P0AFF6 Confidence 45.54% Date Thu Jan 5 11:26:07 GMT 2012 Rank 256 Aligned Residues 60 % Identity 10% Template d1c9oa_ SCOP info OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Resolution 1.17

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		137	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure											.	.																												.	.
Query SS confidence											.	.																												.	.
Query Sequence		I	I	T	G	V	V	K	K	V	.	.	N	R	D	N	I	S	L	D	L	G	N	N	A	E	A	V	I	L	R	E	D	M	L	P	R	E	N	.	.	F	R	P	G	D	R	V	R	G	V	L	Y	S	V	R	P	E	A	R	G	A	Q	L	F
Query Conservation											.	.																												.	.
Alig confidence											.	.																												.	.
Template Conservation
Template Sequence		M	Q	R	G	K	V	K	W	F	N	N	E	K	G	Y	G	F	I	E	V	E	G	G	S	D	V	F	V	H	F	T	A	I	Q	G	E	G	F	K	T	L	E	E	G	Q	E	V	S	F	E	I	V	Q	G	N	R	G	P	Q	A	A	N	V	V
Template Known Secondary structure												T	T	T	T							T	T								G	G	G	B		S	S	S						T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions