Job Description P0AFF6 Confidence 96.91% Date Thu Jan 5 11:26:07 GMT 2012 Rank 89 Aligned Residues 73 % Identity 21% Template c8iczA_ PDB info PDB header:transferase/dna Chain: A: PDB Molecule:protein (dna polymerase beta (e.c.2.7.7.7)); PDBTitle: dna polymerase beta (pol b) (e.c.2.7.7.7) complexed with2 seven base pairs of dna; soaked in the presence of of datp3 (1 millimolar), mncl2 (5 millimolar), and lithium sulfate4 (75 millimolar) Resolution 3.10 Å

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		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.		.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.		.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
Predicted Secondary structure																											.																									.
Query SS confidence																											.																									.
Query Sequence		V	P	M	K	E	L	L	E	I	E	G	L	D	E	P	T	V	E	A	L	R	E	R	A	K	.	N	A	L	A	T	I	A	Q	A	Q	E	E	S	L	G	D	N	K	P	A	D	D	L	L	.	N	L	E	G	V	D	R	D	L	A	F	K	L	A	A	R	G	V	C	T	L	E	D	L	A	E	Q
Query Conservation																											.																									.
Alig confidence																											.																					.	.	.		.
Template Conservation																																																.	.	.
Template Sequence		K	S	G	A	E	A	K	K	L	P	G	V	G	T	K	I	A	E	K	I	D	E	F	L	A	T	G	K	L	R	K	L	E	K	I	R	Q	D	D	T	S	S	S	I	N	F	.	.	.	L	T	R	V	S	G	I	G	P	S	A	A	R	K	F	V	D	E	G	I	K	T	L	E	D	L	R	K	N
Template Known Secondary structure									T	S	T	T															S	S	S																			.	.	.		T	T	S	T	T											T	T	T			S							T
Template Predicted Secondary structure																																																.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions