Job Description P0AFF6 Confidence 50.56% Date Thu Jan 5 11:26:07 GMT 2012 Rank 249 Aligned Residues 105 % Identity 15% Template c3senD_ PDB info PDB header:signaling protein Chain: D: PDB Molecule:caskin-1; PDBTitle: structure of caskin1 tandem sams Resolution 3.10 Å

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		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.		.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.							.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.																											.	.	.	.	.	.
Query SS confidence																																		.																											.	.	.	.	.	.
Query Sequence		E	D	F	A	T	V	L	V	E	E	G	F	S	T	L	E	E	L	A	Y	V	P	M	K	E	L	L	E	I	E	G	L	.	D	E	P	T	V	E	A	L	R	E	R	A	K	N	A	L	A	T	I	A	Q	A	Q	E	E	S	.	.	.	.	.	.	L	G	D	N	K	P	A	D	D	L	L	N	L	E	G
Query Conservation																																		.																											.	.	.	.	.	.
Alig confidence														.																	.			.												.	.	.	.												.	.	.	.	.	.								.	.	.
Template Conservation														.																	.															.	.	.	.																									.	.	.
Template Sequence		Q	L	Y	A	P	N	F	I	S	A	G	Y	.	D	L	P	T	I	S	R	M	T	P	E	D	L	T	A	I	.	G	V	T	K	P	G	H	R	K	K	I	A	A	E	.	.	.	.	I	S	G	L	S	I	P	D	W	L	P	E	H	K	P	A	N	L	A	V	W	L	S	M	.	.	.	I	G	L	A	Q
Template Known Secondary structure		G	G	G						T	T	T		.						T	T									T	.	T														.	.	.	.			T							S		S	S			S	S								.	.	.	T	T		G	G
Template Predicted Secondary structure														.																	.															.	.	.	.																									.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.				.	90	.	.	.
		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	R	D	L	A	F	K	L	A	A	R	G	V	C	T	L	E	D	L	A	E	Q	G	I	D	D	L	A	D	I	E	G	L	T	D	E	K	A	G	A	L	I	M	A	A
Query Conservation
Alig confidence		.	.	.	.																											.
Template Conservation		.	.	.	.																											.
Template Sequence		.	.	.	.	Y	Y	K	V	L	V	D	N	G	Y	E	N	I	D	F	I	T	D	I	T	W	E	D	L	Q	E	.	I	G	I	T	K	L	G	H	Q	K	K	L	M	L	A
Template Known Secondary structure		.	.	.	.	G						T	T	T			S	S	G	G	G	T	T									.	T	T
Template Predicted Secondary structure		.	.	.	.																											.
Template SS confidence
						94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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