Job Description P0AFF6 Confidence 95.69% Date Thu Jan 5 11:26:07 GMT 2012 Rank 111 Aligned Residues 91 % Identity 22% Template c3krmB_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:insulin-like growth factor 2 mrna-binding protein PDBTitle: imp1 kh34 Resolution 2.75 Å

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		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.														.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.		.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Query Sequence		V	G	A	C	V	G	M	R	G	A	R	V	Q	A	V	S	T	E	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	R	I	D	I	V	L	W	D	D	N	P	A	Q	F	V	I	N	A	M	A	P	A	D	V	A	S	I	.	V	V	D	E	D	K	H	T	M	D	I	A	V	E	A	G	N
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation
Template Sequence		V	G	A	I	I	G	K	K	G	Q	H	I	K	Q	L	S	R	F	A	S	A	S	I	K	I	A	P	P	E	T	P	D	S	K	V	R	M	V	I	I	T	G	P	P	E	A	Q	F	K	A	Q	G	R	I	Y	G	K	L	K	E	E	N	F	F	G	E	E	V	K	L	E	T	H	I	R	V	P	A	S	A
Template Known Secondary structure								T	T	S										T	T									S	S	S	S		S																											T	T	S															T	T	T
Template Predicted Secondary structure
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Q	A	I	G	R	N	G	Q	N	V	R	L	A	S	Q	L	S	G	W	E	L	N	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	R	V	I	G	K	G	G	K	T	V	N	E	L	Q	N	L	T	A	A	E	V	V	V
Template Known Secondary structure								G	G	G
Template Predicted Secondary structure
Template SS confidence
		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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