Job Description P0AFF6 Confidence 98.87% Date Thu Jan 5 11:26:07 GMT 2012 Rank 21 Aligned Residues 131 % Identity 19% Template c3go5A_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:multidomain protein with s1 rna-binding domains; PDBTitle: crystal structure of a multidomain protein with nucleic acid binding2 domains (sp_0946) from streptococcus pneumoniae tigr4 at 1.40 a3 resolution Resolution 1.40 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	I	D	V	R	V	Q	I	D	R	K	S	G	D	F	D	T	F	R	R	W	L	V	V	D	E	V	T	Q	P	T	K	E	I	T	L	E	A	A	R	Y	E	D	E	S	L	N	L	G	D	Y	V	E	D	Q	I	E	S	V	T	F	D	R	I	T	T	Q	T	A	K	Q	V	I	V	Q	K	V	R	E
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Sequence		K	D	L	G	V	F	V	D	T	G	L	P	D	K	E	I	V	V	.	.	.	.	.	.	.	.	.	.	.	.	S	L	D	I	L	P	E	L	K	E	L	W	P	.	.	.	.	K	K	G	D	Q	L	Y	I	R	L	E	V	D	K	K	D	R	I	W	G	L	L	A	Y	Q	E	D	F	Q	R	L	A	R
Template Known Secondary structure		T	T	T							S		T	T						.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	S		S	S	G	G	G	S		.	.	.	.		T	T											T	T	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.													.	100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		A	E	R	A	M	V	V	D	Q	F	R	E	H	E	G	E	I	I	T	G	V	V	K	K	V	N	R	D	N	I	S	L	D	L	.	G	N	N	A	E	A	V	I	L	R	E	D	M	L	P	R	E	N	F	R	P	G	D	R	V	R	G	V	L	Y	S	V	R	P	E	A	R	G	A	Q	L	F	V	T
Query Conservation																																				.
Alig confidence				.	.	.	.	.					.	.																						.															.	.																						.	.
Template Conservation				.	.	.	.	.					.	.																																					.	.																						.	.
Template Sequence		P	A	.	.	.	.	.	Y	N	N	X	.	.	Q	N	Q	N	W	P	A	I	V	Y	R	L	K	L	S	G	T	F	V	Y	L	P	E	N	N	X	L	G	F	I	H	P	S	E	R	Y	.	.	A	E	P	R	L	G	Q	V	L	D	A	R	V	I	G	F	R	E	V	D	R	.	.	T	L	N	L	S
Template Known Secondary structure				.	.	.	.	.		S			.	.	T	T												T	T							T	T	T	T							G	G	G		S	.	.	S				T	T												T	T	T	T	.	.
Template Predicted Secondary structure				.	.	.	.	.					.	.																																					.	.																						.	.
Template SS confidence
		145	.						.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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